| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.566507797372] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| plasma membrane part | 8.0641E-5 | 2 | 57 | 2 | 6292 |
| site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
| 1,3-beta-glucan synthase complex | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| plasma membrane | 1.8077E-3 | 2 | 268 | 2 | 6292 |
| integral to plasma membrane | 9.1975E-3 | 2 | 29 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| growth | 5.275E-4 | 2 | 145 | 2 | 6292 |
| signal transduction | 1.1516E-3 | 2 | 214 | 2 | 6292 |
| signal transmission | 1.1841E-3 | 2 | 217 | 2 | 6292 |
| signaling process | 1.1841E-3 | 2 | 217 | 2 | 6292 |
| signaling | 1.598E-3 | 2 | 252 | 2 | 6292 |
| signal transduction during filamentous growth | 2.5415E-3 | 2 | 8 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| molecular transducer activity | 1.5966E-4 | 2 | 80 | 2 | 6292 |
| signal transducer activity | 1.5966E-4 | 2 | 80 | 2 | 6292 |
| osmosensor activity | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| transmembrane receptor activity | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| receptor activity | 4.4455E-3 | 2 | 14 | 1 | 6292 |