| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.57302844152] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| cellular bud neck | 4.1715E-4 | 2 | 129 | 2 | 6292 |
| cellular bud | 6.9196E-4 | 2 | 166 | 2 | 6292 |
| site of polarized growth | 7.0879E-4 | 2 | 168 | 2 | 6292 |
| cellular bud neck contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| actomyosin contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| contractile ring | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| cell division site | 8.5646E-3 | 2 | 27 | 1 | 6292 |
| cell division site part | 8.5646E-3 | 2 | 27 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| exocytosis | 5.2295E-5 | 2 | 46 | 2 | 6292 |
| secretion | 7.2304E-5 | 2 | 54 | 2 | 6292 |
| secretion by cell | 7.2304E-5 | 2 | 54 | 2 | 6292 |
| regulation of secretion | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| regulation of exocytosis | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| regulation of cellular localization | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| regulation of vesicle-mediated transport | 1.9064E-3 | 2 | 6 | 1 | 6292 |
| budding cell isotropic bud growth | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| actin polymerization or depolymerization | 2.859E-3 | 2 | 9 | 1 | 6292 |
| vesicle-mediated transport | 2.9119E-3 | 2 | 340 | 2 | 6292 |
| budding cell apical bud growth | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| intracellular mRNA localization | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| regulation of transport | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| regulation of localization | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| vacuole inheritance | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| establishment of localization in cell | 9.0494E-3 | 2 | 599 | 2 | 6292 |
| mitochondrion inheritance | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| mitochondrion distribution | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| mitochondrion localization | 9.5139E-3 | 2 | 30 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| actin lateral binding | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| actin filament binding | 3.811E-3 | 2 | 12 | 1 | 6292 |
| actin binding | 6.6645E-3 | 2 | 21 | 1 | 6292 |
| protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |