| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.069] [SVM Score: 0.574258596121] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| FOX2 |
|
|
|
| SPS19 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| microbody lumen | 4.5979E-6 | 2 | 14 | 2 | 6292 |
| peroxisomal matrix | 4.5979E-6 | 2 | 14 | 2 | 6292 |
| peroxisomal part | 3.0063E-5 | 2 | 35 | 2 | 6292 |
| microbody part | 3.0063E-5 | 2 | 35 | 2 | 6292 |
| microbody | 8.3521E-5 | 2 | 58 | 2 | 6292 |
| peroxisome | 8.3521E-5 | 2 | 58 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| enoyl-CoA hydratase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| 3-hydroxyacyl-CoA dehydrogenase activity | 3.1786E-4 | 2 | 1 | 1 | 6292 |
| 2,4-dienoyl-CoA reductase (NADPH) activity | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| oxidoreductase activity | 1.9877E-3 | 2 | 281 | 2 | 6292 |
| oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| oxidoreductase activity, acting on the CH-CH group of donors | 7.6148E-3 | 2 | 24 | 1 | 6292 |
| hydro-lyase activity | 8.5646E-3 | 2 | 27 | 1 | 6292 |