| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.038] [SVM Score: 0.609463228911] |
| Complex Size: | 2 proteins |
| Protein |
GO Cellular Component | GO Biological Process | GO Molecular Function |
| VTC1 |
|
|
|
| VTC4 |
|
|
|
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| intrinsic to vacuolar membrane | 1.5158E-7 | 2 | 3 | 2 | 6292 |
| intrinsic to organelle membrane | 1.151E-4 | 2 | 68 | 2 | 6292 |
| vacuolar membrane | 3.1973E-4 | 2 | 113 | 2 | 6292 |
| vacuolar part | 3.6682E-4 | 2 | 121 | 2 | 6292 |
| vacuole | 1.0983E-3 | 2 | 209 | 2 | 6292 |
| intrinsic to membrane | 1.7276E-3 | 2 | 262 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| vacuole fusion, non-autophagic | 1.7735E-5 | 2 | 27 | 2 | 6292 |
| vacuole organization | 5.2295E-5 | 2 | 46 | 2 | 6292 |
| membrane fusion | 1.1171E-4 | 2 | 67 | 2 | 6292 |
| cellular membrane fusion | 1.1171E-4 | 2 | 67 | 2 | 6292 |
| membrane organization | 9.8542E-4 | 2 | 198 | 2 | 6292 |
| cellular membrane organization | 9.8542E-4 | 2 | 198 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |