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Protein Overview: YHR045W

General Information:
Name(s) found: YHR045W [SGD]
Description(s) found:
Found 24 descriptions.
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  • Putative protein of unknown function; possible role in iron metabolism and/or amino acid and carbohydrate metabolism; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 560 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWSFLLQLV ITILLIVLGA NWLLSSFLLD FKRDLTGVAL SQQSSISSVR KENETAYYRS  60
   61 ILVPTGFPLT TGLGLSLKYK IRNGNFGDVW NAIMEVSKGK NIIKFTGREK SYSLSELNGM 120
  121 AKRIFPKLSN KNFKNIGIAN SIATVEGFTL SLASMMTSIR TGSIPHFLPA VPRQRLEDVD 180
  181 VLIIDSWKSF KMLNGSEDWY KLIVVCDDPI ESLQFDANCD VITWKELIDG FTKDTEYQYT 240
  241 PPDDNSDDKK LFAYVTSPWN GTNSFNQICL VSNIAEFIKG FPLGNELNSN EYLTISTKLA 300
  301 NSSASLQIWG KLFAVLLHGG SASFINPTTI DCESLQETTL LFTETKDVVK LIDSNSRSGL 360
  361 LNKIYLSWAT NLLSEGIFTK IARIEPHSLE KLRCVYLADN VKDAEVISTF PEKIPQLKKT 420
  421 NRRITPSTEQ LNKIRAQLGS RVVLELYCPY AIMGPVAHTN FYDYRVFGKS VDDNVVCYGT 480
  481 LSTTLEGKMV ETETNPHLNI EKKQGMLCIR GFSIGKPVES DRLEKALHLA ERFGGGEGWM 540
  541 PLVGVFGLFG QDGCLYIYNQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YHR045W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..560] deduced N/A No confident structure predictions are available.
    2 View Details [90..560] FFAS03 5.68 4-Chlorobenzoyl-CoA Ligase/Synthetase bound to 4-chlorobenzoate

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • ligase activity
    		•  4.06242055385309 bayes_pls_golite062009
  • catalytic activity
    		•  1.69360998653645 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  0.628869837876574 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.618855673590647 bayes_pls_golite062009
  • fatty acid ligase activity
    		•  0.601319691359111 bayes_pls_golite062009
  • binding
    		•  0.556684584703993 bayes_pls_golite062009
  • long-chain fatty acid-CoA ligase activity
    		•  0.512215883711737 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.196112501848345 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.180363467988742 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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