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Protein Overview: UBP3

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Riffle et al. (2010) Manuscript in preparation. BRE5 UBP3
View Details Krogan NJ, et al. (2006) TIP1 UBP3
View Details Gavin AC, et al. (2006) BRE5 UBP3

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run BIR1 No Comments Widlund PO, et al. (2005)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run DAD1 Dam1-765 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run VAM3 hx23: mixture in detergent (control) Investigating Vam3p, Nyv1p and their partners in trans-SNARE complex Hao Xu, et al. (2010)
View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 Keck JM, et al. (2011)
View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #08 Alpha Factor Prep4-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen CTF8 UBP3 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data UBP3 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..253] ORFEUS 14.84 RBP1
2 View Details [254..416] ORFEUS 15.0 No description for 1ldvA was found.
3 View Details [417..499] Pfam 9.79588 No description for PF00442 was found. No confident structure predictions are available.
4 View Details [500..575] deduced N/A No confident structure predictions are available.
5 View Details [576..812] MSA 4.22699 View MSA. No confident structure predictions are available.
6 View Details [813..912] Pfam 24.267606 Ubiquitin carboxyl-terminal hydrolase No confident structure predictions are available.




Philius Transmembrane Prediction:

Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification: 0.99

Source: Reynolds et al. (2008)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle