Protein Overview: UBX7

General Information:
Name(s) found:	UBX7 / YBR273C [SGD]
Description(s) found: Found 25 descriptions. SHOW ALL	UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p [SGD]
Organism:	Saccharomyces cerevisiae
Length:	436 amino acids
Gene Ontology:
Cellular Component:	nuclear envelope [IDA] endoplasmic reticulum [IDA]
Biological Process:	sporulation resulting in formation of a cellular spore [IMP] ubiquitin-dependent protein catabolic process [IMP]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEALFRDSV EEAINDSIKE GVVLAVYNTA RDDQWLKSWF KGDDVSLDTL AEHSIWLRLV  60
   61 KDTEQFQLFE QVFPNVVVPS IYLIRAGKIE LIIQGEDDRH WEKLLACIGI KDKKAGESSS 120
  121 RETNPGLARE EKSSRDVHRK NARERIAETT LEIQRREQLK QRKLAEEERE RIIRLVRADR 180
  181 AERKALDETH HRTLDDDKPL DVHDYIKDAQ KLHSSKCVLQ IRMTDGKTLK HEFNSSETLN 240
  241 DVRKWVDVNR TDGDCPYSFH RGIPRVTFKD SDELKTLETL ELTPRSALLL KPLETQNSGL 300
  301 SVTGMEGPSL LGRLYKGFST WWHNDKDPEV TSQREETSKP NRHEVRSSTP LSGAASSSCF 360
  361 QYNNVREPVQ SSAHASPMLT PSGTRYPSET NLTTSRSVSP NVFQFVNNDH QEDPEDPTTF 420
  421 NGNNVHLEKK KDEDKK

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Krogan NJ, et al. (2006)		BFA1 CDC48 DOA1 FBP1 MRM1 NDT80 NPL4 OTU1 RDS2 SHP1 TEM1 TUP1 UBX4 UBX5 UBX7 UFD1 UFD2 YDR049W YGL108C YJR098C YNL155W YOR342C

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	MLP2	#31 Asynchronous Prep (Protease cleavage)	Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

	PROTEIN(S)	PUBLICATION
View Data	UBX7	Huh WK, et al. (2003)

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
protein disulfide isomerase activity	2.05206748531532	bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing S-S bonds	2.05206748531532	bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting keto- and enol-groups	1.83987272812734	bayes_pls_golite062009
intramolecular oxidoreductase activity	1.5535855642475	bayes_pls_golite062009
catalytic activity	0.672192331361968	bayes_pls_golite062009
binding	0.665189138843282	bayes_pls_golite062009
protein binding	0.157273259994554	bayes_pls_golite062009
hydrolase activity	0.150237022038507	bayes_pls_golite062009
transcription regulator activity	0.13699526678272	bayes_pls_golite062009

No functions predicted.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..78]	deduced	N/A	No confident structure predictions are available.
2	View Details	[79..194]	MSA	2.097993	View MSA. No confident structure predictions are available.
3	View Details	[195..323]	PSI-BLAST	17.154902	p47
4	View Details	[324..436]	deduced	N/A	No confident structure predictions are available.

Protein Overview: UBX7

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: