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Protein Overview: THIP_ECOLI

General Information:
Name(s) found: THIP_ECOLI [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • Thiamine transport system permease protein thiP - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 536 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRRQPLIP GWLIPGVSAT TLVVAVALAA FLALWWNAPQ DDWVAVWQDS YLWHVVRFSF  60
   61 WQAFLSALLS VIPAIFLARA LYRRRFPGRL ALLRLCAMTL ILPVLVAVFG ILSVYGRQGW 120
  121 LATLCQSLGL EWTFSPYGLQ GILLAHVFFN LPMASRLLLQ ALENIPGEQR QLAAQLGMRS 180
  181 WHFFRFVEWP WLRRQIPPVA ALIFMLCFAS FATVLSLGGG PQATTIELAI YQALSYDYDP 240
  241 ARAAMLALLQ MVCCLGLVLL SQRLSKAIAP GTTLLQGWRD PDDRLHSRIC DTVLIVLALL 300
  301 LLLPPLLAVI VDGVNRQLPE VLAQPVLWQA LWTSLRIALA AGVLCVVLTM MLLWSSRELR 360
  361 ARQKMLAGQV LEMSGMLILA MPGIVLATGF FLLLNNTIGL PQSADGIVIF TNALMAIPYA 420
  421 LKVLENPMRD ITARYSMLCQ SLGIEGWSRL KVVELRALKR PLAQALAFAC VLSIGDFGVV 480
  481 ALFGNDDFRT LPFYLYQQIG SYRSQDGAVT ALILLLLCFL LFTVIEKLPG RNVKTD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] FFAS03 7.61 No description for 2onkC was found.
    2 View Details [270..536] PSI-BLAST 23.30103 No description for 2onkC was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • sulfate transmembrane transporter activity
    		•  10.5410256198788 bayes_pls_golite062009
  • sulfate transmembrane-transporting ATPase activity
    		•  8.29749837106188 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  7.61517440483825 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  7.61475955752567 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  7.61475955752567 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  7.60261285611608 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  7.59280303111267 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  7.51217805691059 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  6.95724531600418 bayes_pls_golite062009
  • ATPase activity
    		•  6.62620720611918 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  6.31173441402571 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  6.23822548232138 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  6.21828378422716 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  6.21791205758921 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.46058403247103 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
    		•  5.44734032398062 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.84048533553771 bayes_pls_golite062009
  • hydrolase activity
    		•  4.5940497987178 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  4.24238019900305 bayes_pls_golite062009
  • transporter activity
    		•  4.16850252614298 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.07281957844021 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  3.94646473062144 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.74189499327501 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.61142533583701 bayes_pls_golite062009
  • molybdate transmembrane-transporting ATPase activity
    		•  2.76198656053365 bayes_pls_golite062009
  • molybdate ion transmembrane transporter activity
    		•  2.76198656053365 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  2.19359047382598 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.147054904918 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.96050114748502 bayes_pls_golite062009
  • maltose-transporting ATPase activity
    		•  1.62768691451517 bayes_pls_golite062009
  • oligosaccharide-transporting ATPase activity
    		•  1.62768691451517 bayes_pls_golite062009
  • oligosaccharide transmembrane transporter activity
    		•  1.62768691451517 bayes_pls_golite062009
  • disaccharide transmembrane transporter activity
    		•  1.5877861023737 bayes_pls_golite062009
  • alpha-glucoside transmembrane transporter activity
    		•  1.5877861023737 bayes_pls_golite062009
  • maltose transmembrane transporter activity
    		•  1.5877861023737 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.58031187867436 bayes_pls_golite062009
  • glucoside transmembrane transporter activity
    		•  1.54998466398412 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  0.635517449756608 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  0.634824157502542 bayes_pls_golite062009
  • catalytic activity
    		•  0.350058049038907 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.0914244193736007 bayes_pls_golite062009
  • symporter activity
    		•  0.0914244193736007 bayes_pls_golite062009
    2
    Term Confidence Notes
  • sulfate transmembrane transporter activity
    		•  10.9565051799528 bayes_pls_golite062009
  • sulfate transmembrane-transporting ATPase activity
    		•  8.73635781369483 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  7.98776119907207 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  7.98726234902655 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  7.98726234902655 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  7.97287417765536 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  7.96249144456164 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  7.8678894318504 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  7.29227234008448 bayes_pls_golite062009
  • ATPase activity
    		•  6.94069583578738 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  6.59903874016214 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  6.52169210550643 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  6.50067149801529 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  6.5003333073452 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
    		•  5.79272438461837 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.78398318541319 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  5.07829337366931 bayes_pls_golite062009
  • hydrolase activity
    		•  4.78607811092587 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  4.52297088726018 bayes_pls_golite062009
  • transporter activity
    		•  4.47791794099048 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.39634414867723 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  4.26804338154829 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.91409799494188 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.91336745536039 bayes_pls_golite062009
  • molybdate transmembrane-transporting ATPase activity
    		•  2.9609821483404 bayes_pls_golite062009
  • molybdate ion transmembrane transporter activity
    		•  2.9609821483404 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.67115360425434 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  2.42763030383098 bayes_pls_golite062009
  • maltose-transporting ATPase activity
    		•  2.14010989459818 bayes_pls_golite062009
  • oligosaccharide-transporting ATPase activity
    		•  2.14010989459818 bayes_pls_golite062009
  • oligosaccharide transmembrane transporter activity
    		•  2.14010989459818 bayes_pls_golite062009
  • alpha-glucoside transmembrane transporter activity
    		•  2.09224118357857 bayes_pls_golite062009
  • maltose transmembrane transporter activity
    		•  2.09224118357857 bayes_pls_golite062009
  • disaccharide transmembrane transporter activity
    		•  2.09224118357857 bayes_pls_golite062009
  • glucoside transmembrane transporter activity
    		•  2.04706530621258 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.98807799932923 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.59729360434602 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  0.96228415837358 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  0.75761030349885 bayes_pls_golite062009
  • symporter activity
    		•  0.483541714040201 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.483541714040201 bayes_pls_golite062009
  • catalytic activity
    		•  0.427775057748038 bayes_pls_golite062009
  • maltooligosaccharide-importing ATPase activity
    		•  0.16532450344344 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.0291867591868584 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  0.0202682073710961 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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