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Protein Overview: HMP_ECOLI

General Information:
Name(s) found: HMP_ECOLI [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (HMP) (Nitric oxide dioxygenase) (EC 1.14.12.17) (NO oxygenase) (NOD) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDAQTIATV KATIPLLVET GPKLTAHFYD RMFTHNPELK EIFNMSNQRN GDQREALFNA  60
   61 IAAYASNIEN LPALLPAVEK IAQKHTSFQI KPEQYNIVGE HLLATLDEMF SPGQEVLDAW 120
  121 GKAYGVLANV FINREAEIYN ENASKAGGWE GTRDFRIVAK TPRSALITSF ELEPVDGGAV 180
  181 AEYRPGQYLG VWLKPEGFPH QEIRQYSLTR KPDGKGYRIA VKREEGGQVS NWLHNHANVG 240
  241 DVVKLVAPAG DFFMAVADDT PVTLISAGVG QTPMLAMLDT LAKAGHTAQV NWFHAAENGD 300
  301 VHAFADEVKE LGQSLPRFTA HTWYRQPSEA DRAKGQFDSE GLMDLSKLEG AFSDPTMQFY 360
  361 LCGPVGFMQF TAKQLVDLGV KQENIHYECF GPHKVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..396] PSI-BLAST 93.045757 Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxygen transporter activity
    		•  7.81281381234264 bayes_pls_golite062009
  • oxygen binding
    		•  3.78522064312431 bayes_pls_golite062009
  • hemoglobin binding
    		•  3.17505496298935 bayes_pls_golite062009
  • transporter activity
    		•  2.77225108027137 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.44807175467553 bayes_pls_golite062009
  • binding
    		•  1.56341797572673 bayes_pls_golite062009
  • catalytic activity
    		•  1.45374095556065 bayes_pls_golite062009
  • hemoglobin alpha binding
    		•  1.07662870695556 bayes_pls_golite062009
  • nitric-oxide synthase activity
    		•  0.943011064240739 bayes_pls_golite062009
  • transferase activity
    		•  0.708491789248912 bayes_pls_golite062009
  • riboflavin synthase activity
    		•  0.366634814975673 bayes_pls_golite062009
  • cofactor binding
    		•  0.365255270036622 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.27336340260908 bayes_pls_golite062009
  • coenzyme binding
    		•  0.270924422726986 bayes_pls_golite062009
  • protein binding
    		•  0.144900113694048 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle