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Protein Overview: SO0859

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..294] FFAS03 3.71 No description for 2p7jA was found.
2 View Details [295..410] FFAS03 3.45 M intermediate structure of sensory rhodopsin II/transducer complex in combination with the ground state structure
3 View Details [411..498] deduced N/A No confident structure predictions are available.
4 View Details [499..628] PSI-BLAST 10.154902 Histidine kinase FixL heme domain
5 View Details [629..771] FFAS03 5.51 No description for 2pr5A was found.
6 View Details [772..900] PSI-BLAST 8.69897 No description for 2pr5A was found.
7 View Details [901..1020] PSI-BLAST 9.522879 Histidine kinase FixL heme domain
8 View Details [1021..1145] PSI-BLAST 42.39794 Structure of the entire cytoplasmic portion of a sensor histidine kinase protein
9 View Details [1146..1273] PSI-BLAST 4.69897 No description for 2q2eB was found.
10 View Details [1274..1639] PSI-BLAST 30.0 Response regulator PleD in complex with c-diGMP
11 View Details [1640..1765] PSI-BLAST 67.69897 Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • two-component sensor activity
  • 2.88093868237858 bayes_pls_golite062009
  • protein histidine kinase activity
  • 2.86151216540335 bayes_pls_golite062009
  • phosphotransferase activity, nitrogenous group as acceptor
  • 2.80671328721504 bayes_pls_golite062009
  • protein kinase activity
  • 1.74105675066805 bayes_pls_golite062009
  • two-component response regulator activity
  • 1.62873572477094 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 1.58981311381645 bayes_pls_golite062009
  • kinase activity
  • 1.5133458700147 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 1.31628115739307 bayes_pls_golite062009
  • signal transducer activity
  • 1.10204821596482 bayes_pls_golite062009
  • molecular transducer activity
  • 1.10204821596482 bayes_pls_golite062009
  • catalytic activity
  • 0.970922685016416 bayes_pls_golite062009
  • transferase activity
  • 0.821780694868473 bayes_pls_golite062009
  • binding
  • 0.704248066961418 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • ion transmembrane transporter activity
  • 1.94020112661684 bayes_pls_golite062009
  • transcription regulator activity
  • 1.88422125389203 bayes_pls_golite062009
  • binding
  • 1.79230776794479 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 1.70629448457771 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 1.55042643398568 bayes_pls_golite062009
  • DNA binding
  • 1.54206275665781 bayes_pls_golite062009
  • two-component response regulator activity
  • 1.45691562840107 bayes_pls_golite062009
  • nucleic acid binding
  • 1.41817054839611 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
  • 1.31850321187865 bayes_pls_golite062009
  • transcription factor activity
  • 1.12946889905444 bayes_pls_golite062009
  • protein binding
  • 1.0133195984081 bayes_pls_golite062009
  • potassium channel activity
  • 0.93265112299626 bayes_pls_golite062009
  • voltage-gated ion channel activity
  • 0.92661046549451 bayes_pls_golite062009
  • voltage-gated cation channel activity
  • 0.926512767264521 bayes_pls_golite062009
  • voltage-gated potassium channel activity
  • 0.92204538811959 bayes_pls_golite062009
  • voltage-gated channel activity
  • 0.91469735366704 bayes_pls_golite062009
  • ion channel activity
  • 0.75430461252947 bayes_pls_golite062009
  • cation channel activity
  • 0.73262554730695 bayes_pls_golite062009
  • gated channel activity
  • 0.67217953143815 bayes_pls_golite062009
  • substrate-specific channel activity
  • 0.650205954115699 bayes_pls_golite062009
  • passive transmembrane transporter activity
  • 0.64202076714636 bayes_pls_golite062009
  • channel activity
  • 0.64202076714636 bayes_pls_golite062009
  • two-component sensor activity
  • 0.58151911764083 bayes_pls_golite062009
  • protein histidine kinase activity
  • 0.56538125817883 bayes_pls_golite062009
  • phosphotransferase activity, nitrogenous group as acceptor
  • 0.518111391350209 bayes_pls_golite062009
  • signal transducer activity
  • 0.441034662376355 bayes_pls_golite062009
  • molecular transducer activity
  • 0.441034662376355 bayes_pls_golite062009
  • transporter activity
  • 0.360938622392148 bayes_pls_golite062009
  • catalytic activity
  • 0.285447488878019 bayes_pls_golite062009
  • transcription factor binding
  • 0.24293756478811 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.217804199010847 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.
    7
    Term Confidence Notes
  • ion transmembrane transporter activity
  • 1.94020112661684 bayes_pls_golite062009
  • transcription regulator activity
  • 1.88422125389203 bayes_pls_golite062009
  • binding
  • 1.79230776794479 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 1.70629448457771 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 1.55042643398568 bayes_pls_golite062009
  • DNA binding
  • 1.54206275665781 bayes_pls_golite062009
  • two-component response regulator activity
  • 1.45691562840107 bayes_pls_golite062009
  • nucleic acid binding
  • 1.41817054839611 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
  • 1.31850321187865 bayes_pls_golite062009
  • transcription factor activity
  • 1.12946889905444 bayes_pls_golite062009
  • protein binding
  • 1.0133195984081 bayes_pls_golite062009
  • potassium channel activity
  • 0.93265112299626 bayes_pls_golite062009
  • voltage-gated ion channel activity
  • 0.92661046549451 bayes_pls_golite062009
  • voltage-gated cation channel activity
  • 0.926512767264521 bayes_pls_golite062009
  • voltage-gated potassium channel activity
  • 0.92204538811959 bayes_pls_golite062009
  • voltage-gated channel activity
  • 0.91469735366704 bayes_pls_golite062009
  • ion channel activity
  • 0.75430461252947 bayes_pls_golite062009
  • cation channel activity
  • 0.73262554730695 bayes_pls_golite062009
  • gated channel activity
  • 0.67217953143815 bayes_pls_golite062009
  • substrate-specific channel activity
  • 0.650205954115699 bayes_pls_golite062009
  • passive transmembrane transporter activity
  • 0.64202076714636 bayes_pls_golite062009
  • channel activity
  • 0.64202076714636 bayes_pls_golite062009
  • two-component sensor activity
  • 0.58151911764083 bayes_pls_golite062009
  • protein histidine kinase activity
  • 0.56538125817883 bayes_pls_golite062009
  • phosphotransferase activity, nitrogenous group as acceptor
  • 0.518111391350209 bayes_pls_golite062009
  • signal transducer activity
  • 0.441034662376355 bayes_pls_golite062009
  • molecular transducer activity
  • 0.441034662376355 bayes_pls_golite062009
  • transporter activity
  • 0.360938622392148 bayes_pls_golite062009
  • catalytic activity
  • 0.285447488878019 bayes_pls_golite062009
  • transcription factor binding
  • 0.24293756478811 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.217804199010847 bayes_pls_golite062009
    8 No functions predicted.
    9 No functions predicted.
    10
    Term Confidence Notes
  • two-component response regulator activity
  • 7.02872640261738 bayes_pls_golite062009
  • signal transducer activity
  • 4.51666042720644 bayes_pls_golite062009
  • molecular transducer activity
  • 4.51666042720644 bayes_pls_golite062009
  • transcription regulator activity
  • 4.19396540145756 bayes_pls_golite062009
  • protein histidine kinase activity
  • 2.35011582062573 bayes_pls_golite062009
  • two-component sensor activity
  • 2.32303301074957 bayes_pls_golite062009
  • phosphotransferase activity, nitrogenous group as acceptor
  • 2.28838869071567 bayes_pls_golite062009
  • DNA binding
  • 1.9200042031022 bayes_pls_golite062009
  • nucleic acid binding
  • 1.7951051076633 bayes_pls_golite062009
  • transcription factor activity
  • 1.39074763877806 bayes_pls_golite062009
  • binding
  • 1.22427537074115 bayes_pls_golite062009
  • protein kinase activity
  • 1.00737355751913 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.811771244977462 bayes_pls_golite062009
  • kinase activity
  • 0.725824770559857 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.476057209677045 bayes_pls_golite062009
    11
    Term Confidence Notes
  • nucleoside-triphosphatase activity
  • 1.95073642969863 bayes_pls_golite062009
  • pyrophosphatase activity
  • 1.91141407779641 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 1.9017593265179 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 1.90014393273511 bayes_pls_golite062009
  • anion transmembrane transporter activity
  • 1.84572377553607 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 1.608578860823 bayes_pls_golite062009
  • transporter activity
  • 1.55572428045529 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
  • 1.49339466967388 bayes_pls_golite062009
  • ATPase activity
  • 1.48474288797022 bayes_pls_golite062009
  • two-component response regulator activity
  • 1.45919623810582 bayes_pls_golite062009
  • transmembrane transporter activity
  • 1.38483976298883 bayes_pls_golite062009
  • ATPase activity, coupled
  • 1.37457738689583 bayes_pls_golite062009
  • catalytic activity
  • 1.37148167194523 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
  • 1.3654237778347 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 1.32358677895008 bayes_pls_golite062009
  • binding
  • 1.30574971150356 bayes_pls_golite062009
  • active transmembrane transporter activity
  • 1.24278046928678 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
  • 1.22440281711103 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
  • 1.2014318795788 bayes_pls_golite062009
  • primary active transmembrane transporter activity
  • 1.19670408144267 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
  • 1.17063957238561 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
  • 1.16918853509059 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
  • 1.16885789920943 bayes_pls_golite062009
  • hydrolase activity
  • 1.09839981963412 bayes_pls_golite062009
  • phosphate transmembrane-transporting ATPase activity
  • 1.05293225786874 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.92950870381166 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.9275205656455 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.91280662021456 bayes_pls_golite062009
  • nucleotide binding
  • 0.90809801369052 bayes_pls_golite062009
  • ATP binding
  • 0.59269193555886 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 0.575892074401446 bayes_pls_golite062009
  • adenyl ribonucleotide binding
  • 0.57504013359401 bayes_pls_golite062009
  • adenyl nucleotide binding
  • 0.54853610492983 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
  • 0.139527952740579 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.0838665746103899 bayes_pls_golite062009
  • nucleic acid binding
  • 0.0251017125544788 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle