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Protein Overview: UBXN1_MOUSE

General Information:
Name(s) found: UBXN1_MOUSE [Swiss-Prot]
Description(s) found:
Found 28 descriptions.
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  • UBX domain-containing protein 1 OS=Mus musculus GN=Ubxn1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Mus musculus
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELTALESL IEMGFPRGRA EKALALTGNQ GIEAAMDWLM EHEDDPDVDE PLETPLSHVL  60
   61 GREPTPSEQV GPEGSGSAAG ESRPILTEEE RQEQTKRMLE LVAQKQRERE EREEREALER 120
  121 EKQRRRQGQE LSVARQKLQE DEMRRAAEER RREKAEELAA RQRVREKIER DKAERAKKYG 180
  181 GSVGSRSSPP ATDPGPVPSS PSQEPPTKRE YDQCRIQVRL PDGTSLTQTF RAREQLAAVR 240
  241 LYVELHRGEE PGQDQDPVQL LSGFPRRAFS EADMERPLQE LGLVPSAVLI VAKKCPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..58] PSI-BLAST 14.30103 Solution Structure of RSGI RUH-027, a UBA domain from Mouse cDNA
    2 View Details [59..179] FFAS03 1.01 No description for 2j63A was found.
    3 View Details [180..297] PSI-BLAST 18.39794 Crystal structure of AAA ATPase p97/VCP ND1 in complex with p47 C

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  4.11397638448668 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.93085931991298 bayes_pls_golite062009
  • ubiquitin binding
    		•  3.08647023955532 bayes_pls_golite062009
  • hydrolase activity
    		•  2.88846002372004 bayes_pls_golite062009
  • small conjugating protein binding
    		•  2.81291800174736 bayes_pls_golite062009
  • binding
    		•  1.17122954376528 bayes_pls_golite062009
  • protein binding
    		•  0.378700375319735 bayes_pls_golite062009
  • catalytic activity
    		•  0.25774924710417 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • hydrolase activity
    		•  2.77871378503369 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  2.06714283858345 bayes_pls_golite062009
  • binding
    		•  1.55392638191535 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
    		•  1.48147454986498 bayes_pls_golite062009
  • protein binding
    		•  1.17197911794381 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  1.0818414663245 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.364036714119806 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle