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Protein Overview: CAT5

General Information:
Name(s) found: CAT5 / YOR125C [SGD]
Description(s) found:
Found 21 descriptions.
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  • Protein required for ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with ubiquinone biosynthetic enzymes; required for gluconeogenic gene activation [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 233 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial inner membrane [IDALink to PubMed article]
    Biological Process: ubiquinone biosynthetic process [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRVSVFKP ASRGFSVLSS LKITEHTSAK HTEKPEHAPK CQNLSDAQAA FLDRVIRVDQ  60
   61 AGELGADYIY AGQYFVLAHR YPHLKPVLKH IWDQEIHHHN TFNNLQLKRR VRPSLLTPLW 120
  121 KAGAFAMGAG TALISPEAAM ACTEAVETVI GGHYNGQLRN LANQFNLERT DGTKGPSEEI 180
  181 KSLTSTIQQF RDDELEHLDT AIKHDSYMAV PYTVITEGIK TICRVAIWSA ERI

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) CAT5 COR1 IME4 PRP28 YJL068C

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] Pfam 57.113509 No description for PF03232.3 was found. No confident structure predictions are available.
    2 View Details [136..233] Pfam 41.853872 No description for PF03232.3 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  2.54239919926847 bayes_pls_golite062009
  • binding
    		•  2.15097517783454 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.289249271377329 bayes_pls_golite062009
  • protein binding
    		•  0.222916509072005 bayes_pls_golite062009
  • catalytic activity
    		•  0.219299244701657 bayes_pls_golite062009
  • DNA binding
    		•  0.160477208079303 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.49

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle