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Protein Overview: APA1

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Ho Y, et al. (2002) APA1 GAR1 LSM2 LSM8 QCR2 RPN12 RPN8 RRP42 SMB1 TIF6 YGL117W

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run DAD1 Dam1-765 complex purified from yeast with Dad1-TAP Shimogawa MM, et al. (2006)
View Run MLP2 #31 Asynchronous Prep (Protease cleavage) Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data APA1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..185] ORFEUS 7.22 Galactose-1-phosphate uridylyltransferase
2 View Details [186..321] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • nucleic acid binding
  • 1.74990165024183 bayes_pls_golite062009
  • binding
  • 1.71599870633602 bayes_pls_golite062009
  • hydrolase activity
  • 0.690968602046843 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.342529552808262 bayes_pls_golite062009
  • protein binding
  • 0.315946879872005 bayes_pls_golite062009
  • catalytic activity
  • 0.096119422680995 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle