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Protein Overview: OCT7_ARATH

General Information:
Name(s) found: OCT7_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana GN=OCT7 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 500 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    Biological Process: transport [IEA]
    Molecular Function: carbohydrate transmembrane transporter activity [ISS]
    sugar:hydrogen symporter activity [ISS]
    transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGNTRFTV DEALVAMGFG KFQIYVLAYA GMGWVAEAME MMLLSFVGPA VQSLWNLSAR  60
   61 QESLITSVVF AGMLIGAYSW GIVSDKHGRR KGFIITAVVT FVAGFLSAFS PNYMWLIILR 120
  121 CLVGLGLGGG PVLASWYLEF IPAPSRGTWM VVFSAFWTVG TIFEASLAWL VMPRLGWRWL 180
  181 LAFSSVPSSL LLLFYRWTSE SPRYLILQGR KAEALAILEK IARMNKTQLP PGVLSSELET 240
  241 ELEENKNIPT ENTHLLKAGE SGEAVAVSKI VLKADKEPGF SLLALLSPTL MKRTLLLWVV 300
  301 FFGNAFAYYG VVLLTTELNN SHNRCYPTEK QLRNSNDVNY RDVFIASFAE FPGLLISAAM 360
  361 VDRLGRKASM ASMLFTCCIF LLPLLSHQSP FITTVLLFGG RICISAAFTV VYIYAPEIYP 420
  421 TAVRTTGVGV GSSVGRIGGI LCPLVAVGLV HGCHQTIAVL LFEVVILVSG ICVCLFPFET 480
  481 SGRDLTDSIS ASKEPPSASV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..500] PSI-BLAST 12.0 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  2.54286095434601 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.01247278444729 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.77039368764865 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.66673693200184 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.33203350453105 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.24475883286552 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.24475883286552 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.2309068592963 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.18188709249385 bayes_pls_golite062009
  • binding
    		•  0.105551689569449 bayes_pls_golite062009
  • glycerol-3-phosphate transmembrane transporter activity
    		•  1.26964387230144E-4 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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