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Protein Overview: gi|30261638, gi|...

General Information:
Name(s) found: gi|30261638 [NCBI NR]
gi|30255866 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|30261638|ref|NP_844015.1| bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30255866|gb|AAP25501.1| DnaQ family exonuclease/DinG family helicase, putative [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 934 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [ISSLink to PubMed article]
    Molecular Function: ATP binding [ISSLink to PubMed article]
    DNA helicase activity [ISSLink to PubMed article]
    exonuclease activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRYVVVDL ETTGNSWKDG KDKITQIAAV VVEDGEILEI FSSFINPKRE IPPFITELTG  60
   61 IDESMVKQAP LFEDVAPMVV ELLQGAAFVA HNVHFDWNFL TEELRQAGYT EIHCPKVDTV 120
  121 ELAQILLPTA DSYKLRDLAK QHELEHDQPH RADSDALATA ELFLQFLNEI EKLPLVTLQS 180
  181 LYELSDVFQS DIADVLSENI LKKMMHGKKV AEEYEVYRNI ALRKRNYSLN LSETCSSKFD 240
  241 AFLHKTIDKL ALNMPKFEKR ESQQIMMKEI YTALRDSRFS LIEAGTGTGK TLAYLLPSIY 300
  301 FAKKKEEPVI ISTQTVQLQQ QILEKEIPLL QKIMPFSFEI ALLKGRKHYL CLHKFEYALQ 360
  361 EEEKNYDMAL TKAKILVWLL QTETGDRDEL NIPEGGKLLW NRICSDVHSP GGMQSNWFSR 420
  421 CFYQRAKNKA LFADIVITNH ALLFQDFSSE EPLLASCEHI IFDEAHHIEE AASRTLGEQF 480
  481 SCMYFQLVLS RLGTLETDDV LSKVYKMMKK SEQASRSTFR MVSHSLKELK FDADELFQML 540
  541 RAFIFKQTKQ EQGISNMPLI YRYNTEVEKG KLWDSITELT NRFVYDIRKL LTILQKQVDI 600
  601 LQSKIEWEMH VVTGEFMHLI ELLRKMAQAL QLLILEKNSY VTWMETETKG TIHSTVLYGQ 660
  661 PVHIAERFAD EFLTEKKSVI FTSATLTVND SFAYIKEELG LHDFAPNTLQ VPSPFRFEEQ 720
  721 MKLMVSTDVP FIKKASNEEY IESVSAHIAK IAKATKGRML VLFTSYEMLK EAYTNLKNDE 780
  781 ELEGYLLLTQ SVNNKSRSRL IRKFQEFDKS ILLGTSSFWE GIDIPGDALS CLVIVRLPFT 840
  841 PPYQPMIEAK GEWLKNQGED VFAKLALPQA ILRFKQGFGR LIRTSTDTGT VFVLDRRLTS 900
  901 SSYGKYFLQS IPTVPLYEGP LEELLEQVKE RPTE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] PSI-BLAST 39.09691 No description for 2guiA was found.
    2 View Details [233..934] PSI-BLAST 84.69897 Nucleotide excision repair enzyme UvrB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • exonuclease activity
    		•  1.80771920515619 bayes_pls_golite062009
  • nuclease activity
    		•  1.80465910244067 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.57563059592056 bayes_pls_golite062009
  • hydrolase activity
    		•  1.3554844973302 bayes_pls_golite062009
  • catalytic activity
    		•  1.25233849524628 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
    		•  0.776144771215545 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  0.745159527918618 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.567315548679559 bayes_pls_golite062009
  • DNA polymerase activity
    		•  0.292394942678782 bayes_pls_golite062009
  • endonuclease activity
    		•  0.164428265680495 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
    		•  0.135239303066181 bayes_pls_golite062009
    2
    Term Confidence Notes
  • nucleoside-triphosphatase activity
    		•  1.24600280608126 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.24473801560965 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.22399477088226 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.22305439350957 bayes_pls_golite062009
  • binding
    		•  1.15116915808666 bayes_pls_golite062009
  • hydrolase activity
    		•  1.12103771739722 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • ATPase activity
    		•  0.586053527252563 bayes_pls_golite062009
  • helicase activity
    		•  0.113520297233174 bayes_pls_golite062009
  • DNA-dependent ATPase activity
    		•  0.0863785441153608 bayes_pls_golite062009
  • nucleotide binding
    		•  0.0188404002299471 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.0142207617615038 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.00410396371520677 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.0038904924070306 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle