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Protein Overview: gi|24375450, gi|...

General Information:
Name(s) found: gi|24375450 [NCBI NR]
gi|24350298 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24375450|ref|NP_719493.1| nitrogen regulatory IIA protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350298|gb|AAN56937.1|AE015827_9 nitrogen regulatory IIA protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 147 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nitrogen compound metabolic process [ISSLink to PubMed article]
    nitrate transport [ISSLink to PubMed article]
    phosphoenolpyruvate-dependent sugar phosphotransferase system [ISSLink to PubMed article]
    Molecular Function: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRTILRPE CTTCATPGSK KKVLELISDL AAAQYPTLSS QAIFESLVAR EKMGSTGIGN  60
   61 GIAIPHGRLT DITQPIAILI KCEEPIAFDA IDKQPVDILF ALLVPANQCQ QHLSTLSCMA 120
  121 EKLSDKQVLK QLRKTHDETE LYQVIIG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] PSI-BLAST 30.0 Nitrogen regulatory bacterial protein IIa-ntr

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
    		•  4.89047341597444 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  4.24001113213235 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  3.94111218055933 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  3.92377913213665 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.64568675122187 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.5059397756077 bayes_pls_golite062009
  • transporter activity
    		•  2.16741930408232 bayes_pls_golite062009
  • bicarbonate transmembrane transporter activity
    		•  2.067679569708 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.05879816720019 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.87457143976439 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.82451780056478 bayes_pls_golite062009
  • chloride transmembrane transporter activity
    		•  1.57532948941308 bayes_pls_golite062009
  • anion exchanger activity
    		•  1.57532948941308 bayes_pls_golite062009
  • anion:anion antiporter activity
    		•  1.07225541736305 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.789390286938302 bayes_pls_golite062009
  • catalytic activity
    		•  0.547925219495929 bayes_pls_golite062009
  • binding
    		•  0.396676636991646 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.19707628828681 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.191423093908067 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle