Protein Overview: gi|3318870, gi|3...

General Information:
Name(s) found:	gi\|3318870 [NCBI NR] gi\|3318869 [NCBI NR] gi\|3318868 [NCBI NR] gi\|3318867 [NCBI NR] gi\|157834794 [NCBI NR] gi\|1000056 [NCBI NR]
Description(s) found: Found 8 descriptions. SHOW ALL	gi\|3318870\|pdb\|1URP\|D Chain D, D-Ribose-Binding Protein From Escherichia Coli [NCBI NR] gi\|3318869\|pdb\|1URP\|C Chain C, D-Ribose-Binding Protein From Escherichia Coli [NCBI NR] gi\|3318868\|pdb\|1URP\|B Chain B, D-Ribose-Binding Protein From Escherichia Coli [NCBI NR] gi\|3318867\|pdb\|1URP\|A Chain A, D-Ribose-Binding Protein From Escherichia Coli [NCBI NR] gi\|157834794\|pdb\|2DRI\|A Chain A, Probing Protein-Protein Interactions: The Ribose Binding Protein In Bacterial Transport And Chemotaxis [NCBI NR] gi\|1000056\|pdb\|2DRI\| Chain , D-Ribose-Binding Protein Complexed With Beta-D-Ribose [NCBI NR]
Organism:	Escherichia coli
Length:	271 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDTIALVVST LNNPFFVSLK DGAQKEADKL GYNLVVLDSQ NNPAKELANV QDLTVRGTKI  60
   61 LLINPTDSDA VGNAVKMANQ ANIPVITLDR QATKGEVVSH IASDNVLGGK IAGDYIAKKA 120
  121 GEGAKVIELQ GIAGTSAARE RGEGFQQAVA AHKFNVLASQ PADFDRIKGL NVMQNLLTAH 180
  181 PDVQAVFAQN DEMALGALRA LQTAGKSDVM VVGFDGTPDG EKAVNDGKLA ATIAQLPDQI 240
  241 GAKGVETADK VLKGEKVQAK YPVDLKLVVK Q

Protein Complex Data

	PUBLICATION	TOPOLOGY	COCOMPLEXED PROTEINS
View Details	Noble WS, et al. (2009) Manuscript in preparation.		gi\|134105085, gi... gi\|189095939, gi... gi\|3318870, gi\|3... gi\|60594470, gi\|...

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
pentose transmembrane transporter activity	2.47679209577816	bayes_pls_golite062009
D-ribose transmembrane transporter activity	2.47679209577816	bayes_pls_golite062009
D-ribose-importing ATPase activity	2.47679209577816	bayes_pls_golite062009
monosaccharide-transporting ATPase activity	2.39566008731161	bayes_pls_golite062009
carbohydrate transmembrane transporter activity	1.15685021131727	bayes_pls_golite062009
binding	1.13059008752468	bayes_pls_golite062009
monosaccharide transmembrane transporter activity	0.53966958074777	bayes_pls_golite062009
transporter activity	0.399752289774857	bayes_pls_golite062009
transmembrane transporter activity	0.265529619623159	bayes_pls_golite062009
sugar transmembrane transporter activity	0.23981626136031	bayes_pls_golite062009
active transmembrane transporter activity	0.0415259877073471	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..271]	PSI-BLAST	65.30103	IDENTICAL MUTATIONS AT CORRESPONDING POSITIONS IN TWO HOMOLOGOUS PROTEINS WITH NON-IDENTICAL EFFECTS

Protein Overview: gi|3318870, gi|3...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: