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View Structure Prediction Details

Protein: HEXO2_ARATH
Organism: Arabidopsis thaliana
Length: 580 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HEXO2_ARATH.

Description E-value Query
Range
Subject
Range
gi|108706881, gi... - gi|222624474|gb|EEE58606.1| hypothetical protein OsJ_09944 [Oryza sativa Japonica Group], gi|2157135...
526.0 [0..23] [574..38]

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Predicted Domain #1
Region A:
Residues: [1-580]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTLSKFHVI LIPILFFITL LSPLFSIALP INIWPKPRFL SWPQHKAIAL SPNFTILAPE  60
   61 HQYLSASVTR YHNLIRSENY SPLISYPVKL MKRYTLRNLV VTVTDFSLPL HHGVDESYKL 120
  121 SIPIGSFSAH LLAHSAWGAM RGLETFSQMI WGTSPDLCLP VGIYIQDSPL FGHRGVLLDT 180
  181 SRNYYGVDDI MRTIKAMSAN KLNVFHWHIT DSQSFPLVLP SEPSLAAKGS LGPDMVYTPE 240
  241 DVSKIVQYGF EHGVRVLPEI DTPGHTGSWG EAYPEIVTCA NMFWWPAGKS WEERLASEPG 300
  301 TGQLNPLSPK TYEVVKNVIQ DIVNQFPESF FHGGGDEVIP GCWKTDPAIN SFLSSGGTLS 360
  361 QLLEKYINST LPYIVSQNRT VVYWEDVLLD AQIKADPSVL PKEHTILQTW NNGPENTKRI 420
  421 VAAGYRVIVS SSEFYYLDCG HGGFLGNDSI YDQKESGGGS WCAPFKTWQS IYNYDIADGL 480
  481 LNEEERKLVL GGEVALWSEQ ADSTVLDSRL WPRASALAES LWSGNRDERG VKRCGEAVDR 540
  541 LNLWRYRMVK RGIGAEPIQP LWCLKNPGMC NTVHGALQDQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 145.0
Match: 1o7aA
Description: Human beta-Hexosaminidase B
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 6.26329339735894 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 5.92180849080637 bayes_pls_golite062009
chitinase activity 5.52705867024 bayes_pls_golite062009
galactosidase activity 5.29959220339307 bayes_pls_golite062009
hyalurononglucosaminidase activity 5.08011231554191 bayes_pls_golite062009
alpha-galactosidase activity 4.85819791163713 bayes_pls_golite062009
hexosaminidase activity 4.40461026870613 bayes_pls_golite062009
hydrolase activity 3.5336140444552 bayes_pls_golite062009
beta-N-acetylhexosaminidase activity 2.69072465526737 bayes_pls_golite062009
catalytic activity 1.85569074294201 bayes_pls_golite062009
glucosidase activity 1.85545420386612 bayes_pls_golite062009
chitin binding 1.29046765706168 bayes_pls_golite062009
alpha-glucosidase activity 1.00973231642658 bayes_pls_golite062009
molecular transducer activity 0.934517587656668 bayes_pls_golite062009
signal transducer activity 0.934517587656668 bayes_pls_golite062009
transporter activity 0.882190348056302 bayes_pls_golite062009
binding 0.800444849784015 bayes_pls_golite062009
amylase activity 0.748967897302847 bayes_pls_golite062009
transmembrane transporter activity 0.696239852087965 bayes_pls_golite062009
beta-glucuronidase activity 0.55376725638834 bayes_pls_golite062009
sugar binding 0.52048704356718 bayes_pls_golite062009
receptor binding 0.497417763506343 bayes_pls_golite062009
beta-N-acetylglucosaminidase activity 0.489832278458081 bayes_pls_golite062009
mannosidase activity 0.48536369022293 bayes_pls_golite062009
mannose binding 0.397700317467734 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.266938437560648 bayes_pls_golite062009
substrate-specific transporter activity 0.223550370855368 bayes_pls_golite062009
carbohydrate binding 0.102788238231918 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 7.36798954279472E-5 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle