| Protein: | CLSY4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1132 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLSY4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
426.0 | [0..4] | [1128..1419] |
|
Region A: Residues: [1-201] |
1 11 21 31 41 51
| | | | | |
1 MDMTSCVARR TRSRTESYLN SILNKSKGIS GEEEDQSLGC VNSRTEKRRV NMRDACSPSP 60
61 RKKKRRRRKD DDDDVVFVRT EYPEGKRDDE NVGSTSGNLQ SKSFDFGDRV CDFDADDRNL 120
121 GCEEKASNFN PIDDDDDVVF VGTVQRENDH VEDDDNVGSA SVISPRVCDF DEDDAKVSGK 180
181 ENPLSPDDDD DVVFLGTIAG E
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [202-265] |
1 11 21 31 41 51
| | | | | |
1 NQHVEDVNAG SEVCDILLDD ANLRGEEKTY VSDEVVSLSS SSDDEEDPLE ELGTDSREEV 60
61 SGED
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [266-317] |
1 11 21 31 41 51
| | | | | |
1 RDSGESDMDE DANDSDSSDY VGESSDSSDV ESSDSDFVCS EDEEGGTRDD AT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [318-549] |
1 11 21 31 41 51
| | | | | |
1 CEKNPSEKVY HHKKSRTFRR KHNFDVINLL AKSMLESKDV FKEDIFSWDK IAEVDSREDP 60
61 VVRESSSEKV NEHGKPRERR SFHRVREKNH LNGESFYGGE KLCDGEETIN YSTEDSPPLN 120
121 LRFGCEEPVL IEKTEEEKEL DSLWEDMNVA LTLEGMHSST PDKNGDMLCS KGTHDFVLDD 180
181 EIGLKCVHCA YVAVEIKDIS PAMDKYRPSV NDNKKCSDRK GDPLPNRLEF DA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [550-1132] |
1 11 21 31 41 51
| | | | | |
1 SDPSSFVAPL DNIEGTVWQY VPGIKDTLYP HQQEGFEFIW KNLAGTTKIN ELNSVGVKGS 60
61 GGCIISHKAG TGKTRLTVVF LQSYLKRFPN SHPMVIAPAT LMRTWEDEVR KWNVNIPFYN 120
121 MNSLQLSGYE DAEAVSRLEG NRHHNSIRMV KLVSWWKQKS ILGISYPLYE KLAANKNTEG 180
181 MQVFRRMLVE LPGLLVLDEG HTPRNQSSLI WKVLTEVRTE KRIFLSGTLF QNNFKELSNV 240
241 LCLARPADKD TISSRIHELS KCSQEGEHGR VNEENRIVDL KAMIAHFVHV HEGTILQESL 300
301 PGLRDCVVVL NPPFQQKKIL DRIDTSQNTF EFEHKLSAVS VHPSLYLCCN PTKKEDLVIG 360
361 PATLGTLKRL RLKYEEGVKT KFLIDFIRIS GTVKEKVLVY SQYIDTLKLI MEQLIAECDW 420
421 TEGEQILLMH GKVEQRDRQH MIDNFNKPDS GSKVLLASTK ACSEGISLVG ASRVVILDVV 480
481 WNPSVESQAI SRAFRIGQKR AVFIYHLMVK DTSEWNKYCK QSEKHRISEL VFSSTNEKDK 540
541 PINNEVVSKD RILDEMVRHE KLKHIFEKIL YHPKKSDMNT SFF
|
| Detection Method: | |
| Confidence: | 90.39794 |
| Match: | 1z3iX |
| Description: | Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleoside-triphosphatase activity | 1.69240737024755 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.65296291878002 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.64318297340116 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.64169398852165 | bayes_pls_golite062009 |
| catalytic activity | 1.37148167194523 | bayes_pls_golite062009 |
| binding | 1.30574971150356 | bayes_pls_golite062009 |
| ATPase activity | 1.20060977637766 | bayes_pls_golite062009 |
| transporter activity | 1.14815595550467 | bayes_pls_golite062009 |
| ATPase activity, coupled | 1.08141765801535 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.01232806016411 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.92246823619313 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.89546790004613 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.89065853471483 | bayes_pls_golite062009 |
| hydrolase activity | 0.875592967682638 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.8668136831732 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.86536264587818 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.86511385357843 | bayes_pls_golite062009 |
| nucleic acid binding | 0.495953203188599 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.3056113353665 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.30512981340046 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.30259037403175 | bayes_pls_golite062009 |
| nucleotide binding | 0.28998663538132 | bayes_pls_golite062009 |
| DNA binding | 0.128213991729785 | bayes_pls_golite062009 |
| transcription regulator activity | 0.125640198783258 | bayes_pls_golite062009 |
| helicase activity | 0.00674361801283974 | bayes_pls_golite062009 |
