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View Structure Prediction Details

Protein: SUMO3_ARATH
Organism: Arabidopsis thaliana
Length: 111 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SUMO3_ARATH.

Description E-value Query
Range
Subject
Range
gi|5523975 - gi|5523975|gb|AAD44040.1|AF104023_1 polyprotein [Bovine viral diarrhea virus genotype 2]
139.0 [0..18] [103..177]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPQDDKPI DQEQEAHVIL KVKSQDGDEV LFKNKKSAPL KKLMYVYCDR RGLKLDAFAF  60
   61 IFNGARIGGL ETPDELDMED GDVIDACRAM SGGLRANQRQ WSYMLFDHNG L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.0
Match: 2awtA
Description: No description for 2awtA was found.

Predicted functions:

Term Confidence Notes
SUMO ligase activity 3.84399877513864 bayes_pls_golite062009
small conjugating protein ligase activity 3.71144418714309 bayes_pls_golite062009
ubiquitin-protein ligase activity 2.89535476350045 bayes_pls_golite062009
binding 2.786655943372 bayes_pls_golite062009
acid-amino acid ligase activity 2.72499875710239 bayes_pls_golite062009
transcription regulator activity 2.21955949922709 bayes_pls_golite062009
protein tag 2.15059229834935 bayes_pls_golite062009
nucleic acid binding 1.9984951714209 bayes_pls_golite062009
protein binding 1.86841453215444 bayes_pls_golite062009
DNA binding 1.86539227646379 bayes_pls_golite062009
cytoskeletal protein binding 1.73491621577173 bayes_pls_golite062009
general RNA polymerase II transcription factor activity 1.34783881509181 bayes_pls_golite062009
tubulin binding 0.984710328639471 bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds 0.753885975469065 bayes_pls_golite062009
microtubule binding 0.721760846967789 bayes_pls_golite062009
signal transducer activity 0.65988002090613 bayes_pls_golite062009
molecular transducer activity 0.65988002090613 bayes_pls_golite062009
RNA polymerase II transcription factor activity 0.62324312069889 bayes_pls_golite062009
structural constituent of ribosome 0.599634454232833 bayes_pls_golite062009
structural molecule activity 0.576819726104993 bayes_pls_golite062009
structure-specific DNA binding 0.570143717979967 bayes_pls_golite062009
protein kinase activity 0.325253662829604 bayes_pls_golite062009
single-stranded DNA binding 0.249928925871521 bayes_pls_golite062009
enzyme binding 0.240262781026149 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.0871262449740772 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.0816453389356582 bayes_pls_golite062009
kinase activity 0.0363894273406812 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle