| Protein: | UBQ9_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 322 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBQ9_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
453.0 | [0..1] | [318..160] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MSMQIHAKTL TEKTITIDVV SSDTINNVKA KIQDIEGIPL DQQRLIFSGK LLDDGRTLAD 60
61 YSIQKDSILH LALRLRGGMQ IFVKTLTGKT ITLEVE
|
| Detection Method: |  |
| Confidence: | 30.221849 |
| Match: | 1yx5B |
| Description: | Solution Structure of S5a UIM-1/Ubiquitin Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small conjugating protein ligase activity | 7.96815122865454 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 7.5865326390755 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 6.96506647680367 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 5.87890364671564 | bayes_pls_golite062009 |
| structural constituent of ribosome | 5.80275625219016 | bayes_pls_golite062009 |
| structural molecule activity | 5.37716040292459 | bayes_pls_golite062009 |
| ligase activity | 2.98370000660434 | bayes_pls_golite062009 |
| protein binding | 2.9188688008729 | bayes_pls_golite062009 |
| binding | 2.786655943372 | bayes_pls_golite062009 |
| transcription regulator activity | 2.21955949922709 | bayes_pls_golite062009 |
| tubulin binding | 2.21127283188349 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.20811136250556 | bayes_pls_golite062009 |
| protein tag | 2.15059229834935 | bayes_pls_golite062009 |
| nucleic acid binding | 1.9984951714209 | bayes_pls_golite062009 |
| microtubule binding | 1.92602521631666 | bayes_pls_golite062009 |
| DNA binding | 1.86539227646379 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.06193722939839 | bayes_pls_golite062009 |
| SUMO ligase activity | 0.80391127659342 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.62324312069889 | bayes_pls_golite062009 |
| hydrolase activity | 0.614233748923048 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.536856055841234 | bayes_pls_golite062009 |
| kinase activity | 0.506057697290914 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.410719674374641 | bayes_pls_golite062009 |
| RNA binding | 0.359926300264681 | bayes_pls_golite062009 |
| protein kinase activity | 0.325253662829604 | bayes_pls_golite062009 |
| enzyme binding | 0.240262781026149 | bayes_pls_golite062009 |
| transferase activity | 0.236208643697075 | bayes_pls_golite062009 |
|
Region A: Residues: [97-141] |
1 11 21 31 41 51
| | | | | |
1 SSDTIDNVKA KIQDKEGVPP DQQRLIFAGK QLDDGRTLAD YNIQK
|
| Detection Method: | |
| Confidence: | 3.045757 |
| Match: | 1a5rA |
| Description: | STRUCTURE DETERMINATION OF THE SMALL UBIQUITIN-RELATED MODIFIER SUMO-1, NMR, 10 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small conjugating protein ligase activity | 7.96815122865454 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 7.5865326390755 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 6.96506647680367 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 5.87890364671564 | bayes_pls_golite062009 |
| structural constituent of ribosome | 5.80275625219016 | bayes_pls_golite062009 |
| structural molecule activity | 5.37716040292459 | bayes_pls_golite062009 |
| ligase activity | 2.98370000660434 | bayes_pls_golite062009 |
| protein binding | 2.9188688008729 | bayes_pls_golite062009 |
| binding | 2.786655943372 | bayes_pls_golite062009 |
| transcription regulator activity | 2.21955949922709 | bayes_pls_golite062009 |
| tubulin binding | 2.21127283188349 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.20811136250556 | bayes_pls_golite062009 |
| protein tag | 2.15059229834935 | bayes_pls_golite062009 |
| nucleic acid binding | 1.9984951714209 | bayes_pls_golite062009 |
| microtubule binding | 1.92602521631666 | bayes_pls_golite062009 |
| DNA binding | 1.86539227646379 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.06193722939839 | bayes_pls_golite062009 |
| SUMO ligase activity | 0.80391127659342 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.62324312069889 | bayes_pls_golite062009 |
| hydrolase activity | 0.614233748923048 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.536856055841234 | bayes_pls_golite062009 |
| kinase activity | 0.506057697290914 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.410719674374641 | bayes_pls_golite062009 |
| RNA binding | 0.359926300264681 | bayes_pls_golite062009 |
| protein kinase activity | 0.325253662829604 | bayes_pls_golite062009 |
| enzyme binding | 0.240262781026149 | bayes_pls_golite062009 |
| transferase activity | 0.236208643697075 | bayes_pls_golite062009 |
|
Region A: Residues: [142-322] |
1 11 21 31 41 51
| | | | | |
1 ESTLHLVLRL RGGMQIFVRT LTRKTIALEV ESSDTTDNVK AKIQDKEGIP PDQQRLIFAG 60
61 KQLEDGRTLA DYNIQKESTL HLVLRLCGGM QIFVNTLTGK TITLEVESSD TIDNVKAKIQ 120
121 DKERIQPDQQ RLIFAGEQLE DGYYTLADYN IQKESTLHLV LRLRGGECFG FIFLFLLCFN 180
181 S
|
| Detection Method: | |
| Confidence: | 20.221849 |
| Match: | 1z2mA |
| Description: | Crystal Structure of ISG15, the Interferon-Induced Ubiquitin Cross Reactive Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small conjugating protein ligase activity | 7.96815122865454 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 7.5865326390755 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 6.96506647680367 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 5.87890364671564 | bayes_pls_golite062009 |
| structural constituent of ribosome | 5.80275625219016 | bayes_pls_golite062009 |
| structural molecule activity | 5.37716040292459 | bayes_pls_golite062009 |
| ligase activity | 2.98370000660434 | bayes_pls_golite062009 |
| protein binding | 2.9188688008729 | bayes_pls_golite062009 |
| binding | 2.786655943372 | bayes_pls_golite062009 |
| transcription regulator activity | 2.21955949922709 | bayes_pls_golite062009 |
| tubulin binding | 2.21127283188349 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.20811136250556 | bayes_pls_golite062009 |
| protein tag | 2.15059229834935 | bayes_pls_golite062009 |
| nucleic acid binding | 1.9984951714209 | bayes_pls_golite062009 |
| microtubule binding | 1.92602521631666 | bayes_pls_golite062009 |
| DNA binding | 1.86539227646379 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.06193722939839 | bayes_pls_golite062009 |
| SUMO ligase activity | 0.80391127659342 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.62324312069889 | bayes_pls_golite062009 |
| hydrolase activity | 0.614233748923048 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.536856055841234 | bayes_pls_golite062009 |
| kinase activity | 0.506057697290914 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.410719674374641 | bayes_pls_golite062009 |
| RNA binding | 0.359926300264681 | bayes_pls_golite062009 |
| protein kinase activity | 0.325253662829604 | bayes_pls_golite062009 |
| enzyme binding | 0.240262781026149 | bayes_pls_golite062009 |
| transferase activity | 0.236208643697075 | bayes_pls_golite062009 |
