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View Structure Prediction Details

Protein: mrp-1
Organism: Caenorhabditis elegans
Length: 328 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mrp-1.

Description E-value Query
Range		 Subject
Range
gi|146297202, gi... - gi|82500846|ref|ZP_00886240.1| ATPas [Caldicellulosiruptor saccharolyticus DSM 8903], gi|82401164|gb...
 367.0 [0..3] [325..271]

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Predicted Domain #1
Region A:
Residues: [1-328] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGNLIVLSS AGAAVYFRDS PGLSAGLVGL SVSYALNITQ TLNWAVRMTS ELETNIVAVE  60
   61 RINEYTITPT EGNNSQSLAP KSWPENGEIS IKNFSVRYRP GLDLVLHGVT AHISPCEKIG 120
  121 IVGRTGAGKS SLTLALFRII EADGGCIEID GTNIADLLLE QLRSRLTIVP QDPVLFSGTM 180
  181 RMNLDPFFAF SDDQIWEALR NAHLDSFVKS LQEGLHHHIS EGGENLSVGQ RQLICLARAL 240
  241 LRKTKVLVLD EAAAAVDVET DSLLQKTIRE QFKDCTVLTI AHRLNTVMDS DRLLVLDKGC 300
  301 VAEFDTPKKL LSNPDGIFYS MAKDANVV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.69897
Match: 2hydA
Description: No description for 2hydA was found.

Predicted functions:

Term Confidence Notes
substrate-specific transmembrane transporter activity 3.4837867129694 bayes_pls_golite062009
ion transmembrane transporter activity 3.35436118751376 bayes_pls_golite062009
transporter activity 3.10463051760206 bayes_pls_golite062009
cation transmembrane transporter activity 3.08390071341252 bayes_pls_golite062009
drug transmembrane transporter activity 2.97119034312001 bayes_pls_golite062009
transmembrane transporter activity 2.95886887664984 bayes_pls_golite062009
nucleoside-triphosphatase activity 2.89122312915795 bayes_pls_golite062009
pyrophosphatase activity 2.81593838944939 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 2.79724985811732 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 2.79347973548337 bayes_pls_golite062009
organic acid transmembrane transporter activity 2.67957846350199 bayes_pls_golite062009
carboxylic acid transmembrane transporter activity 2.67815672695824 bayes_pls_golite062009
primary active transmembrane transporter activity 2.61775212528604 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 2.61467977505707 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 2.57552435627908 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 2.57107347424517 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 2.57054427875021 bayes_pls_golite062009
active transmembrane transporter activity 2.50494515048649 bayes_pls_golite062009
ATPase activity 2.44176688200537 bayes_pls_golite062009
ATPase activity, coupled 2.43862163407966 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 2.40292717311506 bayes_pls_golite062009
amine transmembrane transporter activity 2.29486577878686 bayes_pls_golite062009
metal ion transmembrane transporter activity 2.26365379756656 bayes_pls_golite062009
binding 2.21604035604783 bayes_pls_golite062009
2.20174656498665 bayes_pls_golite062009
hydrogen ion transporting ATP synthase activity, rotational mechanism 2.1115517127743 bayes_pls_golite062009
substrate-specific transporter activity 1.91091452720653 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 1.82177108193332 bayes_pls_golite062009
amino acid transmembrane transporter activity 1.59627719545436 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 1.58971273330352 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 1.4343912580786 bayes_pls_golite062009
hydrolase activity 1.40217504818333 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 1.23799860254751 bayes_pls_golite062009
protein binding 1.22129154759482 bayes_pls_golite062009
cation channel activity 0.997064416395892 bayes_pls_golite062009
purine nucleotide binding 0.929901285538132 bayes_pls_golite062009
nucleotide binding 0.922442819194247 bayes_pls_golite062009
purine ribonucleotide binding 0.920987930180051 bayes_pls_golite062009
ribonucleotide binding 0.920926158369519 bayes_pls_golite062009
copper ion transmembrane transporter activity 0.798934081014025 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 0.767424210804186 bayes_pls_golite062009
inorganic anion transmembrane transporter activity 0.69784475011795 bayes_pls_golite062009
voltage-gated cation channel activity 0.688632087597536 bayes_pls_golite062009
anion transmembrane-transporting ATPase activity 0.563503770238611 bayes_pls_golite062009
voltage-gated channel activity 0.562664200036023 bayes_pls_golite062009
voltage-gated ion channel activity 0.559798751382976 bayes_pls_golite062009
branched-chain aliphatic amino acid transmembrane transporter activity 0.442220326523999 bayes_pls_golite062009
anion transmembrane transporter activity 0.43332053110728 bayes_pls_golite062009
ATP binding 0.41092997612902 bayes_pls_golite062009
adenyl ribonucleotide binding 0.385813421701492 bayes_pls_golite062009
adenyl nucleotide binding 0.377870145186619 bayes_pls_golite062009
potassium channel activity 0.329290830676079 bayes_pls_golite062009
gated channel activity 0.299411774392227 bayes_pls_golite062009
GTPase activity 0.20164416416912 bayes_pls_golite062009
nucleic acid binding 0.194779852865789 bayes_pls_golite062009
iron ion transmembrane transporter activity 0.160869143323446 bayes_pls_golite062009
ion channel activity 0.154779598791225 bayes_pls_golite062009
amino acid-transporting ATPase activity 0.147644650870465 bayes_pls_golite062009
amine-transporting ATPase activity 0.135455889967401 bayes_pls_golite062009
passive transmembrane transporter activity 0.134817721656507 bayes_pls_golite062009
channel activity 0.134817721656507 bayes_pls_golite062009
substrate-specific channel activity 0.126911677161968 bayes_pls_golite062009
protein transporter activity 0.104820191623932 bayes_pls_golite062009
cation-transporting ATPase activity 0.0536898657672154 bayes_pls_golite062009
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Created and Maintained by: Michael Riffle