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View Structure Prediction Details

Protein: egl-4
Organism: Caenorhabditis elegans
Length: 780 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-4.

Description E-value Query
Range
Subject
Range
egl-4 - status:Confirmed UniProt:Q8MXG7 protein_id:AAM98010.1
578.0 [0..37] [780..1]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGSRPSSG GGGGGGGASG GAGGGAPGGG GGGIRGFFSK LRKPSDQPNG NQVQVGTRTF  60
   61 EAHELQKLIP QLEEAISRKD AQLRQQQTIV EGHIKRISEL EGEVTTLQRE CDKLRSVLEQ 120
  121 KAQSAASPGG QPPSPSPRTD QLGNDLQQKA VLPADGVQRA KKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #2
Region A:
Residues: [164-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVSAEPTNFE NKPATLQHYN KTVGAKQMIR DAVQKNDFLK QLAKEQIIEL VNCMYEMRAR  60
   61 AGQWVIQEGE PGDRLFVVAE GELQVSREGA LLGKMRAGTV MGELAILYNC TRTASVQALT 120
  121 DVQLWVLDRS VFQMITQRLG MERHSQLMNF LTKVSIFQNL SEDRISKMAD VMDQDYYDGG 180
  181 HYIIRQGE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.69897
Match: 1rgsA
Description: REGULATORY SUBUNIT OF CAMP DEPENDENT PROTEIN KINASE
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [352-741]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGDAFFVINS GQVKVTQQIE GETEPREIRV LNQGDFFGER ALLGEEVRTA NIIAQAPGVE  60
   61 VLTLDRESFG KLIGDLESLK KDYGDKERLA QVVREPPSPV KIVDDFREEF AQVTLKNVKR 120
  121 LATLGVGGFG RVELVCVNGD KAKTFALKAL KKKHIVDTRQ QEHIFAERNI MMETSTDWIV 180
  181 KLYKTFRDQK FVYMLLEVCL GGELWTTLRD RGHFDDYTAR FYVACVLEGL EYLHRKNIVY 240
  241 RDLKPENCLL ANTGYLKLVD FGFAKKLASG RKTWTFCGTP EYVSPEIILN KGHDQAADYW 300
  301 ALGIYICELM LGRPPFQASD PMKTYTLILK GVDALEIPNR RIGKTATALV KKLCRDNPGE 360
  361 RLGSGSGGVN DIRKHRWFMG FDWEGLRSRT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.30103
Match: 1k9aA
Description: Carboxyl-terminal src kinase (csk)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
cyclic nucleotide-dependent protein kinase activity 4.97855712164511 bayes_pls_golite062009
cAMP-dependent protein kinase activity 4.66277812893755 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
protein binding 3.19631993182765 bayes_pls_golite062009
molecular transducer activity 3.13508395312263 bayes_pls_golite062009
signal transducer activity 3.13508395312263 bayes_pls_golite062009
binding 3.12724619324809 bayes_pls_golite062009
transmembrane receptor activity 2.59526003830791 bayes_pls_golite062009
transmembrane receptor protein kinase activity 2.54265774272269 bayes_pls_golite062009
receptor activity 2.39311927684508 bayes_pls_golite062009
transcription regulator activity 2.32209932468336 bayes_pls_golite062009
tubulin binding 2.18641675163967 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 2.16831387024372 bayes_pls_golite062009
cytoskeletal protein binding 2.12615078788254 bayes_pls_golite062009
insulin receptor binding 2.1238568876176 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
DNA binding 1.92481088182068 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
microtubule binding 1.88110801192607 bayes_pls_golite062009
actin binding 1.87817875565699 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.85015570449703 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.81249386965144 bayes_pls_golite062009
molecular adaptor activity 1.81145713371725 bayes_pls_golite062009
nucleic acid binding 1.78648274233597 bayes_pls_golite062009
kinase activity 1.78069536883109 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.59739467025045 bayes_pls_golite062009
SH3/SH2 adaptor activity 1.59474164216385 bayes_pls_golite062009
receptor binding 1.52843393025918 bayes_pls_golite062009
protein kinase activity 1.4654611643382 bayes_pls_golite062009
ErbB-3 class receptor binding 1.25765701903393 bayes_pls_golite062009
transcription factor activity 1.22542472051838 bayes_pls_golite062009
transferase activity 1.19152443245584 bayes_pls_golite062009
transporter activity 1.11833481501707 bayes_pls_golite062009
ErbB-2 class receptor binding 1.02996109010965 bayes_pls_golite062009
transmembrane transporter activity 0.97575992765505 bayes_pls_golite062009
insulin-like growth factor receptor binding 0.950445630788802 bayes_pls_golite062009
phosphoinositide 3-kinase binding 0.87390239070604 bayes_pls_golite062009
growth factor binding 0.86076618871384 bayes_pls_golite062009
transcription activator activity 0.846644791435606 bayes_pls_golite062009
protein binding, bridging 0.83823250804321 bayes_pls_golite062009
MAP kinase activity 0.81943579965027 bayes_pls_golite062009
actin filament binding 0.794152600084 bayes_pls_golite062009
substrate-specific transporter activity 0.705905455086486 bayes_pls_golite062009
phosphoinositide 3-kinase regulator activity 0.688047400629641 bayes_pls_golite062009
protein complex binding 0.65988681496356 bayes_pls_golite062009
protein phosphorylated amino acid binding 0.649814096718101 bayes_pls_golite062009
structural constituent of cytoskeleton 0.612883428421652 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.499492353295369 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.48345772948903 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.450699332958421 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
MAP kinase kinase kinase activity 0.37115026509016 bayes_pls_golite062009
MAP kinase kinase activity 0.35402045013148 bayes_pls_golite062009
phosphotyrosine binding 0.311079584914389 bayes_pls_golite062009
insulin receptor substrate binding 0.29798436765753 bayes_pls_golite062009
insulin receptor activity 0.237134032032089 bayes_pls_golite062009
protein tyrosine kinase activity 0.206747304356052 bayes_pls_golite062009
transforming growth factor beta receptor activity 0.20643152368029 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity 0.20643152368029 bayes_pls_golite062009
phosphoprotein binding 0.16798254471727 bayes_pls_golite062009
cytokine receptor binding 0.16478124520484 bayes_pls_golite062009
ion transmembrane transporter activity 0.148194101970458 bayes_pls_golite062009
kinase binding 0.131981353175621 bayes_pls_golite062009
kinase regulator activity 0.10704587503284 bayes_pls_golite062009
transforming growth factor beta receptor activity, type I 0.0506751594607393 bayes_pls_golite062009
receptor signaling protein activity 0.0443241110585009 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.0040394359628233 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [742-780]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKPPILPKVS NPADVTNFDN YPPDNDVPPD EFSGWDEGF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.09691
Match: 1ctpE
Description: cAMP-dependent PK, catalytic subunit
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle