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View Structure Prediction Details

Protein: plc-4
Organism: Caenorhabditis elegans
Length: 751 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for plc-4.

Description E-value Query
Range
Subject
Range
PLCD1_RAT - 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus GN=Plcd1 PE=1...
gi|206220 - gi|206220|gb|AAA41886.1| phospholipase C-III
636.0 [0..14] [749..8]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSVSPEEQ AAAQAADEEK TKEELEWAEK GSLLCRIKNQ KVKEMALVTI KSKQFLNYYS  60
   61 SYWFNFVPNA LKSVALSELL EVRSGYQTDN LQRASKKYEF QELAPESRCF SVIFSHAKFL 120
  121 HKSVDFSADS KETRDKWVSV LTHLISVAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 1maiA
Description: STRUCTURE OF THE PLECKSTRIN HOMOLOGY DOMAIN FROM PHOSPHOLIPASE C DELTA IN COMPLEX WITH INOSITOL TRISPHOSPHATE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
SH2 domain binding 3.65625799344693 bayes_pls_golite062009
binding 3.29080729281876 bayes_pls_golite062009
protein binding 3.17213698546013 bayes_pls_golite062009
phosphoinositide 3-kinase binding 2.88942227773914 bayes_pls_golite062009
insulin receptor binding 1.93662993549038 bayes_pls_golite062009
transcription regulator activity 1.57653457217606 bayes_pls_golite062009
nucleic acid binding 1.35724984140766 bayes_pls_golite062009
DNA binding 1.35019502849174 bayes_pls_golite062009
signal transducer activity 1.34134699517825 bayes_pls_golite062009
molecular transducer activity 1.34134699517825 bayes_pls_golite062009
transporter activity 1.28986800087234 bayes_pls_golite062009
enzyme binding 1.17212675145623 bayes_pls_golite062009
receptor activity 1.02045773197699 bayes_pls_golite062009
transmembrane receptor activity 0.990048359575281 bayes_pls_golite062009
insulin-like growth factor receptor binding 0.893216890968741 bayes_pls_golite062009
substrate-specific transporter activity 0.79883446648737 bayes_pls_golite062009
receptor binding 0.57115269387131 bayes_pls_golite062009
protein domain specific binding 0.51731521446502 bayes_pls_golite062009
cytoskeletal protein binding 0.36659178919568 bayes_pls_golite062009
GTPase regulator activity 0.355387992614734 bayes_pls_golite062009
nucleoside-triphosphatase regulator activity 0.335498703113274 bayes_pls_golite062009
actin binding 0.2957828973861 bayes_pls_golite062009
protein complex binding 0.22543440052247 bayes_pls_golite062009
enzyme regulator activity 0.189879136353541 bayes_pls_golite062009
pyrophosphatase activity 0.00282726023356339 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [150-751]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HQRVVFNETA WLIDKFQQAD TNKNGLLSFD EVWNLLKRMN LQISERYAKA IFRESEFENS  60
   61 RDNKLNEKEF LNFFERLTDR PDLRFVMTQA SSDNVETLTV ADLQRFLTEE QGFENVDLKK 120
  121 AEQILTTFEQ TVQDKQKEKL MGLMGMRRLM QSRWGNVFKP GHESIFQDMD QPLTHYFVNS 180
  181 SHNTYLTGLQ VKGEATVEGY ISALRKGARL LELDLFDGEH GEPVITHKRT FIESITLRNS 240
  241 LEAIKRTAFE TSPYPVILTL ENHVGFVQQA VMADLFKEIL GDSLYIPPKD SHRHPLSSPN 300
  301 KLKRKFLLRG KKIILEEDIE EPDEDDSPTD KDKHHVHPHP VAPELSALIG LPSVKLSHNI 360
  361 YQDVNKHPFD GSPSLSENKV YTMFEAAVPI FTYTAERLVK SYPKGLRQDS SNMHPMVSWL 420
  421 CGIQSVAMNF QTAGEELDLN AGLFRINGNC GYVLKPSCLL DGVDPRSMAK PKLKLGIGLF 480
  481 SAQYLPKSEP GKEIIDPYVS VQIFGIPRDE TKAKTRIIKD NGFNPEWRDN FYFTLSCPEL 540
  541 AIIRFCVKDF DSTSSNDFVG EFSIPVMSLR TGFSQIQLNT GYQHTLDPSA SLFVRIAMEE 600
  601 EY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 152.0
Match: 1djgA
Description: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!); PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain; Phospholipase C isozyme D1 (PLC-D1)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
inositol or phosphatidylinositol phosphodiesterase activity 6.15718686264587 bayes_pls_golite062009
phosphoinositide phospholipase C activity 6.15718686264587 bayes_pls_golite062009
phosphoric diester hydrolase activity 3.98600273089157 bayes_pls_golite062009
transcription regulator activity 1.70224798223084 bayes_pls_golite062009
phospholipase C activity 1.69567069819233 bayes_pls_golite062009
binding 1.68488937304436 bayes_pls_golite062009
hydrolase activity 1.52158542563317 bayes_pls_golite062009
protein binding 1.44033231686342 bayes_pls_golite062009
nucleic acid binding 1.33654529506691 bayes_pls_golite062009
DNA binding 1.3098416020159 bayes_pls_golite062009
catalytic activity 1.22328099675039 bayes_pls_golite062009
transporter activity 1.15928534291452 bayes_pls_golite062009
phosphoric ester hydrolase activity 1.11279017101076 bayes_pls_golite062009
phospholipase activity 0.964221011759725 bayes_pls_golite062009
molecular transducer activity 0.949608579595809 bayes_pls_golite062009
signal transducer activity 0.949608579595809 bayes_pls_golite062009
transmembrane transporter activity 0.945691505472547 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.936568622355831 bayes_pls_golite062009
amine transmembrane transporter activity 0.717054504236607 bayes_pls_golite062009
substrate-specific transporter activity 0.693724160233023 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.45412801027969 bayes_pls_golite062009
cytoskeletal protein binding 0.37583220367244 bayes_pls_golite062009
lipase activity 0.254072795277849 bayes_pls_golite062009
active transmembrane transporter activity 0.246383459363256 bayes_pls_golite062009
ion transmembrane transporter activity 0.193201281459889 bayes_pls_golite062009
cation transmembrane transporter activity 0.0305250212662123 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle