| Protein: | pof11 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 506 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pof11.
| Description | E-value | Query Range |
Subject Range |
|
|
501.0 | [0..3] | [505..1171] |
|
|
480.0 | [0..3] | [505..1085] |
|
|
479.0 | [0..3] | [505..564] |
|
|
478.0 | [0..3] | [505..947] |
|
|
467.0 | [0..3] | [505..778] |
|
|
463.0 | [0..3] | [505..952] |
|
Region A: Residues: [1-506] |
1 11 21 31 41 51
| | | | | |
1 MNQDDNGKNV VSKVSDLTSC SDFSTSSPVP CLNPLSHENN RIDLIRDLLA SLSKEGVVAV 60
61 YNHVRSLLFT DFTEVFPEEV SLRVFSYLDQ LDLCKCKLMS KRWKRLLEDP GIWKALYMQK 120
121 GWFVNENVLN EFEAWRRTHK FPQPRFENFL KQQNIIGPYG TMFLPQQFIF DSNGRPLLNW 180
181 SYLYKEHAHL DSNWRHGRFL VSTFNNPSIR FPADQDFRAT LDSVYCVQYD DEIMVSGSKD 240
241 RTVSVWDVNS RFILYKLYGH SGSVLCLDFC RRRNLLVSGS SDSTIIIWDW QNRRPLKVYF 300
301 GHTDNVLGVV VSENYIISSS RDHTARVWRL DATSPAEACM HVLRGHLASV NSVQYSSKTG 360
361 LIVTASSDRT LRTWDITTGH CIRIIHAHQR GIACAQYNGK FIVSGSSDLT IRIFEASSGK 420
421 LLRMLQGHED LIRTVRFNDE KIVSGGYDGT VRIWNFNTGE QHCVLHNSRN SRVFGLQFDH 480
481 RRIIACTHSS EILVWNFDDG LDCTFF
|
| Detection Method: |  |
| Confidence: | 62.0 |
| Match: | 1p22A |
| Description: | F-box/WD-repeat protein 1 (beta-TRCP1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 7.6976390971701 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 7.38724968585043 | bayes_pls_golite062009 |
| dynactin binding | 7.11157019623125 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 6.41826641115519 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 5.36089569430187 | bayes_pls_golite062009 |
| myosin heavy chain kinase activity | 4.33124151198369 | bayes_pls_golite062009 |
| GTPase activity | 4.02994814377904 | bayes_pls_golite062009 |
| actin binding | 3.86142918698875 | bayes_pls_golite062009 |
| myosin II binding | 3.56132510021228 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| dynein binding | 2.54821997913979 | bayes_pls_golite062009 |
| peroxisome targeting sequence binding | 2.43196533618619 | bayes_pls_golite062009 |
| binding | 2.42570478946173 | bayes_pls_golite062009 |
| ligase activity | 2.30636108809275 | bayes_pls_golite062009 |
| protein binding | 2.26925404328312 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 2.10926890165617 | bayes_pls_golite062009 |
| transcription regulator activity | 2.10348788067437 | bayes_pls_golite062009 |
| actin filament binding | 2.0735069176589 | bayes_pls_golite062009 |
| nucleic acid binding | 2.00420268007946 | bayes_pls_golite062009 |
| DNA binding | 1.53482914288832 | bayes_pls_golite062009 |
| platelet-activating factor acetyltransferase activity | 1.36229564654648 | bayes_pls_golite062009 |
| peroxisome matrix targeting signal-2 binding | 1.26984584070766 | bayes_pls_golite062009 |
| transporter activity | 1.21549336905926 | bayes_pls_golite062009 |
| receptor activity | 1.12819778129653 | bayes_pls_golite062009 |
| microtubule plus-end binding | 1.01166033978052 | bayes_pls_golite062009 |
| myosin binding | 0.989691178611801 | bayes_pls_golite062009 |
| molecular transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| signal transducer activity | 0.974380908248463 | bayes_pls_golite062009 |
| protein transporter activity | 0.964340340346761 | bayes_pls_golite062009 |
| type 1 angiotensin receptor binding | 0.920323565472959 | bayes_pls_golite062009 |
| angiotensin receptor binding | 0.920323565472959 | bayes_pls_golite062009 |
| transcription factor activity | 0.897833210520351 | bayes_pls_golite062009 |
| kinase activity | 0.807669232329985 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.805273887494167 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.734793983890004 | bayes_pls_golite062009 |
| transcription activator activity | 0.724420384084538 | bayes_pls_golite062009 |
| dynein intermediate chain binding | 0.707581908546932 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.634547834947756 | bayes_pls_golite062009 |
| transcription repressor activity | 0.624053529462119 | bayes_pls_golite062009 |
| protein kinase activity | 0.544118712921054 | bayes_pls_golite062009 |
| transcription factor binding | 0.469377587704245 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.446034974847705 | bayes_pls_golite062009 |
| insulin receptor binding | 0.43316396073854 | bayes_pls_golite062009 |
| snoRNA binding | 0.347797037104681 | bayes_pls_golite062009 |
| 0.309947462700731 | bayes_pls_golite062009 | |
| structural molecule activity | 0.254012051644049 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.245000508226811 | bayes_pls_golite062009 |
| hydrolase activity | 0.181211933860468 | bayes_pls_golite062009 |
| histone binding | 0.166694897714113 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.161639372576406 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.0803897416817422 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.0676565515282608 | bayes_pls_golite062009 |
| receptor binding | 0.0390635451962911 | bayes_pls_golite062009 |
| kinase binding | 0.0366162235750993 | bayes_pls_golite062009 |
| protein kinase binding | 0.00858004043229577 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
