| Protein: | XNP-PB, XNP-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1311 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XNP-PB, XNP-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
637.0 | [0..1] | [1311..1] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MGKKNPNARH TDAATPLTTD DSNSSSVSRR ESATESKSAS ESESSPPRSN TKQSRTHKNV 60
61 KASGKATVSS SSDSDQAVAN SSANDEEKEP VCKIRIVPLE KLLASPKTKE RPSRGSQQKN 120
121 VTINDSSDEE PLKGSKLVLP ARKSRNKNAS IIELSDSEEV D
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [162-395] |
1 11 21 31 41 51
| | | | | |
1 EEEESLLVAI PLPKEAQQTK PEKNSSKASK ESIEKRQKAQ KEATTSSARA IRSVNGTRRG 60
61 SLSSERSSRA SSSRAESPPR PKRCVVRLKR VSLPKTKPAQ KPKKMSSDSE EAATTSKKSR 120
121 QRRSKSESEA DSDYEAPAAE EEEEEERKSS GDEEEAANSS DSEVMPQRKR RRKKSESDKG 180
181 SSDFEPEEKQ KKKGRKRIKK TSSGESDGDG DDDKQKNKRK HIRKIIKTKD LDLT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [396-939] |
1 11 21 31 41 51
| | | | | |
1 TKEAAKEEDD RRKRIEDRQK LYNRIFVKSE SVEINELVLD FDEESKKALL QVDKGLLKKL 60
61 KPHQVAGVKF MWDACFETLK ESQEKPGSGC ILAHCMGLGK TLQVVTLSHT LLVNTRRTGV 120
121 DRVLIISPLS TVNNWAREFT SWMKFANRND IEVYDISRYK DKPTRIFKLN EWFNEGGVCI 180
181 LGYDMYRILA NEKAKGLRKK QREQLMQALV DPGPDLVVCD EGHLLKNEKT SISKAVTRMR 240
241 TKRRIVLTGT PLQNNLREYY CMIQFVKPNL LGTYKEYMNR FVNPITNGQY TDSTERDLRL 300
301 MKHRSHILHK LLEGCIQRRD YSVLAPYLPP KHEYVVYTTL SELQQKLYGY YMTTHREQSG 360
361 GDVVGKGARL FQDFQDLRRI WTHPMNLRVN SDNVIAKRLL SNDDSDMEGF ICDETDEDEA 420
421 ASNSSDSCET FKSDASMSGL AASSGKVKKR KTRNGNAGGG DSDSDLEMLG GLGGGSSVQK 480
481 DDPSEWWKPF VEERELNNVH HSPKLLILLR LLQQCEAIGD KLLVFSQSLQ SLDVIEHFLS 540
541 LVDS
|
| Detection Method: | |
| Confidence: | 88.0 |
| Match: | 1z3iX |
| Description: | Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.16853848306485 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.36915495988847 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.29436982996465 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.27303683020046 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.27190707957159 | bayes_pls_golite062009 |
| nucleic acid binding | 2.09956015274464 | bayes_pls_golite062009 |
| transcription regulator activity | 2.09345198747025 | bayes_pls_golite062009 |
| DNA binding | 1.87765278833074 | bayes_pls_golite062009 |
| ATPase activity | 1.76238574289941 | bayes_pls_golite062009 |
| ATPase activity, coupled | 1.57826779898847 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 1.23094623498843 | bayes_pls_golite062009 |
| motor activity | 1.14667913749579 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| hydrolase activity | 0.98565595572967 | bayes_pls_golite062009 |
| DNA helicase activity | 0.75415390146713 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.725611289205392 | bayes_pls_golite062009 |
| nucleotide binding | 0.717697610309727 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.713814218071151 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.713752628021599 | bayes_pls_golite062009 |
| transcription factor activity | 0.682439846757997 | bayes_pls_golite062009 |
| microtubule motor activity | 0.60036517876321 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.500462538667228 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.41398614759796 | bayes_pls_golite062009 |
| protein binding | 0.193768631623192 | bayes_pls_golite062009 |
| ATP binding | 0.19169045543599 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.165732470448462 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.162060759063149 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.144154288308693 | bayes_pls_golite062009 |
| centromeric DNA binding | 0.120185906020979 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.114463153989353 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.089234257580272 | bayes_pls_golite062009 |
| helicase activity | 0.0775311459068899 | bayes_pls_golite062009 |
| actin binding | 0.00482938540552702 | bayes_pls_golite062009 |
|
Region A: Residues: [940-1090] |
1 11 21 31 41 51
| | | | | |
1 NTKNYEFEGD VGDFKGCWTS GKDYFRLDGS CSVEQREAMC KQFNNITNLR ARLFLISTRA 60
61 GGLGINLVAA NRVVIFDVSW NPSHDTQSIF RVYRFGQIKP CYIYRLIAMG TMEQKVYERQ 120
121 VAKQATAKRV IDEQQISRHY NQTDLMELYS Y
|
| Detection Method: | |
| Confidence: | 29.69897 |
| Match: | 1z5zA |
| Description: | Sulfolobus solfataricus SWI2/SNF2 ATPase C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1091-1311] |
1 11 21 31 41 51
| | | | | |
1 ELKPSTEREM PILPKDRLFA EILTEHEKLI FKYHEHDSLL EQEEHENLTE EERKSAWAEY 60
61 EAEKTRTVQA SQYMSYDRNA FGNQVMGQFG NASGSVTSNK IFGFRSDILL QLLNMKISKD 120
121 HQELNQNQVI QLVPTYLQQL YNEMNNGDPT MYKDLLNLHS NIVHPSGMYM NPLLYANQNP 180
181 NAAGYNQGTG GVPPMAGGSV AHGPPAAPAP GFEPDKVYEI D
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
