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View Structure Prediction Details

Protein: aux-PA, aux-PB
Organism: Drosophila melanogaster
Length: 1165 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aux-PA, aux-PB.

Description E-value Query
Range
Subject
Range
gi|54639380, gi|... - gi|54639380|gb|EAL28782.1| GA10740-PA [Drosophila pseudoobscura], gi|125777513|ref|XP_001359632.1| G...
753.0 [0..1] [1165..1]

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Predicted Domain #1
Region A:
Residues: [1-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEFFKSLNL NYFSSSEVNG AAGNGAPEAL GGRLDNDFVG QVVEVAGHRL RIKCVIAEGG  60
   61 YAFVYVAQDV QTGTEYALKR LIGADMQAST AIINEINIHK QLSGHENIVA FVGSSYTAPS 120
  121 TQLGAQYLLL TELCKGGSLV DCFRTNNAPF NPTCVLRIFY QMARAVASLH SQSPPIAHRD 180
  181 IKIENFLIGN DKQIKLCDFG SASTEVLSPT FEWSANQRSM LEDQLNTVTT PMYRSPEMLD 240
  241 TWSNNPIGPK VDIWALGCIL YFLCYRKHPY EDGGKLRIIN ANYMLPPDPQ YQCFSDIIRG 300
  301 CLKVNPFERL DITMVLEGLA ALAETHNWSL KGPLDLHIMP IESLPAESPL KSSAYSEVYT 360
  361 EPLSAAIPSS YNGHGSLLSS LRGGAGTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.154902
Match: 1xjdA
Description: Crystal Structure of PKC-theta complexed with Staurosporine at 2A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphotransferase activity, alcohol group as acceptor 5.49988294224815 bayes_pls_golite062009
protein kinase activity 5.4586557943719 bayes_pls_golite062009
kinase activity 5.3287080791198 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.96052051118534 bayes_pls_golite062009
protein serine/threonine kinase activity 4.46381887831481 bayes_pls_golite062009
transferase activity 3.97138602499442 bayes_pls_golite062009
binding 2.74863538127007 bayes_pls_golite062009
protein binding 2.276111749106 bayes_pls_golite062009
ATP binding 1.97600611746091 bayes_pls_golite062009
adenyl ribonucleotide binding 1.93596671856664 bayes_pls_golite062009
adenyl nucleotide binding 1.90928021591891 bayes_pls_golite062009
purine ribonucleotide binding 1.65732943334212 bayes_pls_golite062009
ribonucleotide binding 1.65726906484847 bayes_pls_golite062009
purine nucleotide binding 1.63763394711025 bayes_pls_golite062009
nucleotide binding 1.63195828048121 bayes_pls_golite062009
transcription regulator activity 1.56748951434625 bayes_pls_golite062009
nucleic acid binding 1.46547714006072 bayes_pls_golite062009
protein tyrosine kinase activity 1.3898059094397 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 1.38496328649031 bayes_pls_golite062009
DNA binding 1.35333135345112 bayes_pls_golite062009
receptor signaling protein activity 1.27291233344322 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
transcription factor activity 1.10928254946881 bayes_pls_golite062009
transcription activator activity 0.997272622653026 bayes_pls_golite062009
transmembrane receptor activity 0.913893847407112 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.821371946077904 bayes_pls_golite062009
receptor activity 0.775180603313375 bayes_pls_golite062009
cyclin-dependent protein kinase activity 0.499492353295369 bayes_pls_golite062009
protein serine/threonine/tyrosine kinase activity 0.48345772948903 bayes_pls_golite062009
transmembrane receptor protein tyrosine kinase activity 0.461392047923247 bayes_pls_golite062009
RNA polymerase II transcription factor activity 0.401250804041384 bayes_pls_golite062009
magnesium ion binding 0.393328812780268 bayes_pls_golite062009
MAP kinase kinase kinase activity 0.37115026509016 bayes_pls_golite062009
MAP kinase kinase activity 0.35402045013148 bayes_pls_golite062009
signal transducer activity 0.270054246024761 bayes_pls_golite062009
molecular transducer activity 0.270054246024761 bayes_pls_golite062009
MAP kinase activity 0.26024936404169 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [389-694]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKNIKDTSTK VMQTMQQSLA RNDLDISHIT SRILVMPCPS DGFESTYKTN NIEDVRLSLE  60
   61 SRFVPQKLSI YNFGQRTEPR LPPPVRTVEA GSVYGCPQAH APNLQGLFTV SADMYNFLNA 120
  121 DPKSVVIVQT GDSGGCTAAT VICALLMYAD LLREPEDAVQ VFAVKRHTIN LRPSEFRYLY 180
  181 YFGDILRPTP LLPHYKNTTL VSLSCQPVPR MTKARDGCRI YMEVYCNGNL LLSTLQDYEK 240
  241 MRLYQAGPGK IVLPINLTAC GDVTVVLFHA RKGMVRPQGL KICQFQFNTG FIPEPETLIT 300
  301 FTNQDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.69897
Match: 1d5rA
Description: Pten tumor suppressor (Phoshphoinositide phosphatase), C-terminal domain; Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphatase activity 3.46044873655892 bayes_pls_golite062009
phosphoprotein phosphatase activity 3.31810516049102 bayes_pls_golite062009
phosphoric ester hydrolase activity 3.27287246441913 bayes_pls_golite062009
protein tyrosine phosphatase activity 2.72498052648516 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 2.31514936029825 bayes_pls_golite062009
protein binding 2.12487185456363 bayes_pls_golite062009
binding 2.06015698112379 bayes_pls_golite062009
nucleic acid binding 2.05424732017237 bayes_pls_golite062009
DNA binding 1.95001230878269 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.56455764981613 bayes_pls_golite062009
hydrolase activity 1.5596484415033 bayes_pls_golite062009
kinase activity 1.54798529194457 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.36326098454926 bayes_pls_golite062009
protein kinase activity 1.3466747511896 bayes_pls_golite062009
transmembrane receptor activity 1.19889854601141 bayes_pls_golite062009
calcium-dependent phospholipid binding 1.06635493706319 bayes_pls_golite062009
catalytic activity 1.06283028154109 bayes_pls_golite062009
transferase activity 1.05480035577492 bayes_pls_golite062009
receptor activity 1.01393772058468 bayes_pls_golite062009
transmembrane receptor protein tyrosine phosphatase activity 0.743245088266464 bayes_pls_golite062009
transmembrane receptor protein phosphatase activity 0.743245088266464 bayes_pls_golite062009
protein tyrosine/serine/threonine phosphatase activity 0.631313032497835 bayes_pls_golite062009
SNARE binding 0.501334097212321 bayes_pls_golite062009
neurexin binding 0.27749877320051 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [695-1078]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDLPDPEQVT PRFCVSLSLA VTDSESPPSH KPPWMPAKPK RSPAALFSSD LEYAEMLDNF  60
   61 VTKPSTRSSP PPGARKSDRV SSPLVLPDVT ETAHELPSPM PEPSPPIDLL NLNQQPSDVP 120
  121 AADPLTSAKP STDASFDLLG AFGDDDSTGI GSAPIPDILP PPPLQQPQPK INNDPFDIFG 180
  181 SVDQGGVPSM KPSGFPPFVG SLPTFVAQPA ATTNPSPTHP ARASADPFAN IADLATGLNL 240
  241 NFNRSTLSGK SPVNTSPQPT QFSSPTHKPS PSSQPQATFM HTPPTPQTLP STSSIRTPTQ 300
  301 PQAVPAQSRP DYSRLHFDSQ KAAQQPGTGG SKNSDIFADI LGQQGYSFGS KMNQCPRSIN 360
  361 EMRKEDLFKD MDPKKVRIME WTDG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.69897
Match: 1y0fB
Description: No description for 1y0fB was found.

Predicted Domain #4
Region A:
Residues: [1079-1165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKNNIRALLC SMHTVLWDNA KWQRCEMSTM VTPTEVKKAY RRACLAVHPD KHNGTENEEI  60
   61 AKLIFMELNN AWTDFENDAT QQNMFNA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.39794
Match: 1n4cA
Description: NMR Structure of the J-Domain and Clathrin Substrate Binding Domain of Bovine Auxilin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle