| Protein: | Gpo-1-PD, Gpo-1-... |
| Organism: | Drosophila melanogaster |
| Length: | 724 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gpo-1-PD, Gpo-1-....
| Description | E-value | Query Range |
Subject Range |
|
|
442.0 | [0..1] | [724..1] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MTSRMFKFGV TAASACVGSV LASYTLDRWN TPHVVNNATV PPKRKRTLPP RADQIKSLMS 60
61 GEEFDVLII
|
| Detection Method: |  |
| Confidence: | 5.522879 |
| Match: | 2braA |
| Description: | Structure of N-Terminal FAD Binding motif of mouse MICAL |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [70-551] |
1 11 21 31 41 51
| | | | | |
1 GGGATGAGCA LDSVTRGLKT ALVELDDFAS GTSSRSTKLI HGGVRYLQKA ILGLDLEQYR 60
61 MVKEALAERA TMLESAPHLT HPLPIMLPVY TWWQVPYYWV GIKAYDLVAG DRNVKSSYYL 120
121 SKKDALELFP MLKKDKLCGA IVYYDGQQDD ARMCLAVALT AARHGATVCN HVEVKELLKK 180
181 DDGTGKQVLC GAKVKDHISG KEFTVKAKCI VNAAGPFTDS IRKMDNPTVK SICCPSSGVH 240
241 IVLPGYYSPD QMGLLDPSTS DGRVIFFLPW QRQTIAGTTD LPCEITHNPT PTEDEIQFIL 300
301 NEIKNYLNAD VEVRRGDVLS AWSGIRPLVS DPNKDDTQSL ARNHIVHVSP SNLITIAGGK 360
361 WTTYRAMAEH TIDAAIKACN LKPERAEAVT SYLKIEGGQG WTPTMYIRLV QDFGLECEVA 420
421 QHLAKSYGDR AFAVSKMASL TGKRWPIIGN RIHPEFPYID AEIRYGVREY ACTAVDMIAR 480
481 RL
|
| Detection Method: | |
| Confidence: | 34.522879 |
| Match: | 1pj5A |
| Description: | Crystal structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with acetate |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxidoreductase activity, acting on NADH or NADPH | 5.26950448055146 | bayes_pls_golite062009 |
| oxidoreductase activity | 2.3417445147889 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor | 2.25002926602325 | bayes_pls_golite062009 |
| electron-transferring-flavoprotein dehydrogenase activity | 1.55451764082771 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor | 1.45104542724719 | bayes_pls_golite062009 |
| transporter activity | 1.29839290134235 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on sulfur group of donors | 1.18990628739838 | bayes_pls_golite062009 |
| antioxidant activity | 1.12347155061135 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | 1.08975609376408 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.07862908893913 | bayes_pls_golite062009 |
| catalytic activity | 1.03127962968326 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors | 0.955909900559292 | bayes_pls_golite062009 |
| binding | 0.850689563354756 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.811783414198063 | bayes_pls_golite062009 |
| dihydrolipoyl dehydrogenase activity | 0.69501605197281 | bayes_pls_golite062009 |
| NADPH-adrenodoxin reductase activity | 0.573803337547311 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.55964362614766 | bayes_pls_golite062009 |
| pyruvate dehydrogenase activity | 0.494423552127166 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH group of donors | 0.442625746935807 | bayes_pls_golite062009 |
| protein binding | 0.370064403093958 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.262741975112034 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 0.224438371728402 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.164825358655637 | bayes_pls_golite062009 |
| nucleic acid binding | 0.162130833238942 | bayes_pls_golite062009 |
| amine oxidase activity | 0.0576694782267841 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.057221373695437 | bayes_pls_golite062009 |
| DNA binding | 0.022476246602636 | bayes_pls_golite062009 |
|
Region A: Residues: [552-724] |
1 11 21 31 41 51
| | | | | |
1 RLAFLNVQAA QEALPVIVDI MGEELGWSKD EKERQIKHAT EFLANEMGHS VNRTSKERIP 60
61 IKLSKEEIQT YIKRFQLIDK DKKGYVSIND IRRALKSFGD GDVSGEQLHE ILREIDTNMN 120
121 GQVELDEYLQ MMSAIKTGDV AYSRFARMAE LEEQKHEAAN LKQISVDRSG GGL
|
| Detection Method: | |
| Confidence: | 27.09691 |
| Match: | 1mxeA |
| Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.30946149202257 | bayes_pls_golite062009 |
| protein binding | 1.18539140568889 | bayes_pls_golite062009 |
| transporter activity | 1.15928534291452 | bayes_pls_golite062009 |
| calcium ion binding | 1.03474411638676 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.945691505472547 | bayes_pls_golite062009 |
| ion binding | 0.882500417315612 | bayes_pls_golite062009 |
| cation binding | 0.87665890173512 | bayes_pls_golite062009 |
| metal ion binding | 0.87665890173512 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.693724160233023 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.45412801027969 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.246383459363256 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.2350628837209 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.193201281459889 | bayes_pls_golite062009 |
| motor activity | 0.0886596083402598 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0305250212662123 | bayes_pls_golite062009 |
| molecular transducer activity | 0.0215587845132821 | bayes_pls_golite062009 |
| signal transducer activity | 0.0215587845132821 | bayes_pls_golite062009 |
