| Protein: | SGT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 395 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SGT1.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-84 | [1..395] | [1..395] |
|
|
2.0E-78 | [4..395] | [6..371] |
|
|
2.0E-75 | [4..395] | [6..365] |
|
|
6.0E-72 | [61..395] | [30..336] |
|
|
1.0E-71 | [42..395] | [6..325] |
|
|
2.0E-70 | [4..395] | [2..348] |
|
|
6.0E-70 | [55..395] | [24..333] |
|
Region A: Residues: [1-54] |
1 11 21 31 41 51
| | | | | |
1 MPVEKDLKTA YKALYDEKEP LKALHLYDEI LKGSPTNLTA LIFKAACLEK LYFG
|
| Detection Method: |  |
| Confidence: | 22.221849 |
| Match: | 1a17__ |
| Description: | Protein phosphatase 5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 6.63746543212322 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 6.37753885031863 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 5.68162115570289 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 4.89523122092864 | bayes_pls_golite062009 |
| binding | 2.07985546140154 | bayes_pls_golite062009 |
| ligase activity | 1.72049482453565 | bayes_pls_golite062009 |
| protein binding | 1.6279032205159 | bayes_pls_golite062009 |
| signal sequence binding | 0.0492289984665799 | bayes_pls_golite062009 |
|
Region A: Residues: [55-232] |
1 11 21 31 41 51
| | | | | |
1 FSDWHSDATM ENAKELLDKA LMTAEGRGDR SKIGLVNFRY FVHFFNIKDY ELAQSYFKKA 60
61 KNLGYVDDTL PLWEDRLETK LNKKNKKQKD STNKHTIKPV ESIENRGDNN SSHSPISPLK 120
121 IETAPQESPK FKIDWYQSST SVTISLFTVN LPESKEQVNI YISPNDRRTL SISYQVPK
|
| Detection Method: | |
| Confidence: | 2.045757 |
| Match: | 1d8dA_ |
| Description: | Protein farnesyltransferase alpha-subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [233-316] |
1 11 21 31 41 51
| | | | | |
1 SGSEFQYNAK LSHEVDPKAV SLKIFPKKLE ITLSKIDSTQ WKKLEEDILT ESSRLSDEGK 60
61 NSDSATRLLS AETASKERLS YPSS
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 1lg0A_ |
| Description: | No description for 1lg0A_ was found. |
|
Region A: Residues: [317-395] |
1 11 21 31 41 51
| | | | | |
1 SKKKIDWSKL DIDEEADEEA GSADSFFQKL YAGADPDTKR AMMKSFIESN GTALSTDWED 60
61 VSKGTVKTSP PEGMEPKHW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
