| Protein: | ATG8 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 117 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG8.
| Description | E-value | Query Range |
Subject Range |
|
|
6.0E-51 | [1..117] | [12..128] |
|
|
1.0E-48 | [1..116] | [598..715] |
|
|
3.0E-48 | [2..116] | [3..117] |
|
|
7.0E-47 | [1..116] | [1..116] |
|
|
4.0E-46 | [1..116] | [1..116] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MKSTFKSEYP FEKRKAESER IADRFKNRIP VICEKAEKSD IPEIDKRKYL VPADLTVGQF 60
61 VYVIRKRIML PPEKAIFIFV NDTLPPTAAL MSAIYQEHKD KDGFLYVTYS GENTFGR
|
| Detection Method: |  |
| Confidence: | 366.69897 |
| Match: | 1eo6A_ |
| Description: | Golgi-associated ATPase enhancer of 16 kD, Gate-16 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| tubulin binding | 3.8719684227967 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 3.71144418714309 | bayes_pls_golite062009 |
| microtubule binding | 3.61517229466799 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 3.30801071565148 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.11253399564789 | bayes_pls_golite062009 |
| beta-tubulin binding | 2.878827078106 | bayes_pls_golite062009 |
| binding | 2.786655943372 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 2.72499875710239 | bayes_pls_golite062009 |
| GABA receptor binding | 2.41579236188889 | bayes_pls_golite062009 |
| protein tag | 2.15059229834935 | bayes_pls_golite062009 |
| protein binding | 1.86841453215444 | bayes_pls_golite062009 |
| transcription regulator activity | 1.42747465816672 | bayes_pls_golite062009 |
| nucleic acid binding | 1.32707653701567 | bayes_pls_golite062009 |
| DNA binding | 1.22622447288034 | bayes_pls_golite062009 |
| molecular transducer activity | 0.87452559909702 | bayes_pls_golite062009 |
| signal transducer activity | 0.87452559909702 | bayes_pls_golite062009 |
| SUMO ligase activity | 0.80391127659342 | bayes_pls_golite062009 |
| hydrolase activity | 0.79940718386175 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.753885975469065 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.599634454232833 | bayes_pls_golite062009 |
| structural molecule activity | 0.576819726104993 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.536856055841234 | bayes_pls_golite062009 |
| kinase activity | 0.506057697290914 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.410719674374641 | bayes_pls_golite062009 |
| protein kinase activity | 0.325253662829604 | bayes_pls_golite062009 |
| enzyme binding | 0.240262781026149 | bayes_pls_golite062009 |
| transferase activity | 0.236208643697075 | bayes_pls_golite062009 |
