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View Structure Prediction Details

Protein: IBR5_ARATH
Organism: Arabidopsis thaliana
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IBR5_ARATH.

Description E-value Query
Range
Subject
Range
CE49298 - WBGene00004215 locus:ptp-3 status:Confirmed UniProt:V6CJV7 protein_id:CDK13321.1
201.0 [0..3] [248..1713]

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Predicted Domain #1
Region A:
Residues: [1-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL  60
   61 GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL DNEKVLQFDD AIKFLDQCEK 120
  121 DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE 180
  181 QGIFGSEMMS AMNINDAPTF GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG 240
  241 ATPPKPTTGG DIAMDGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.522879
Match: 1m3gA
Description: Mapk phosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.64405851770591 bayes_pls_golite062009
transmembrane receptor activity 1.71881440893805 bayes_pls_golite062009
receptor activity 1.65044367827526 bayes_pls_golite062009
binding 1.48294418947116 bayes_pls_golite062009
protein binding 1.28180613509993 bayes_pls_golite062009
transporter activity 1.21792561830727 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.05851499617042 bayes_pls_golite062009
transmembrane transporter activity 1.00030784939308 bayes_pls_golite062009
phosphatase activity 0.962127208720361 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.93097476366585 bayes_pls_golite062009
phosphoprotein phosphatase activity 0.924889934263746 bayes_pls_golite062009
protein tyrosine phosphatase activity 0.783287380695883 bayes_pls_golite062009
substrate-specific transporter activity 0.73846553033987 bayes_pls_golite062009
molecular transducer activity 0.694110913819698 bayes_pls_golite062009
signal transducer activity 0.694110913819698 bayes_pls_golite062009
catalytic activity 0.520226245445552 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.49044345981587 bayes_pls_golite062009
ion transmembrane transporter activity 0.200180223985633 bayes_pls_golite062009
cytoskeletal protein binding 0.184628402192253 bayes_pls_golite062009
transmembrane receptor protein phosphatase activity 0.0363353184827848 bayes_pls_golite062009
transmembrane receptor protein tyrosine phosphatase activity 0.0363353184827848 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle