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View Structure Prediction Details

Protein: gi|16125729, gi|...
Organism: Caulobacter crescentus CB15
Length: 635 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16125729, gi|....

Description E-value Query
Range
Subject
Range
gi|48850516, gi|... - gi|87201265|ref|YP_498522.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kina...
671.0 [0..7] [626..17]

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Predicted Domain #1
Region A:
Residues: [1-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHQSALIAE DIEAYLHQHQ HKSLLRFITC GSVDDGKSTL IGRLLYDSKM IFEDQMAALE  60
   61 VDSRKVGTQG GAIDFALLVD GLAAEREQGI TIDVAYRFFS TEKRKFIVAD TPGHEQYTRN 120
  121 MVTGASTADA AVILIDARKG VLTQTRRHSY LVSLLGIRHV VLAVNKMDLV GWDKGVFDAI 180
  181 VADYRAFAEQ IGLSVFTPIP ISGLGGDNMA TRSDATPWFE GPILMDWLEA VEVEDDLQAK 240
  241 PFRMPVQWVN RPNLDFRGFS GLIASGSIKP GDRIRALPSG RESRVARIVT LPGDLDQAVA 300
  301 GQSVTLTLED EIDISRGDVI AAADAPAPVA NQFEATLVWM DDEPLPPGRT YLLKLGARTV 360
  361 GASITDIKHR VNVNTLEKTA AKRLELNEIG VCNLSLDQAI PFEAYAENRH MGGFILIDRL 420
  421 SNRTVGAGLI N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 106.0
Match: 1zunB
Description: Crystal Structure of a GTP-Regulated ATP Sulfurylase Heterodimer from Pseudomonas syringae
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
translation elongation factor activity 8.90683166637832 bayes_pls_golite062009
translation factor activity, nucleic acid binding 4.8378725567094 bayes_pls_golite062009
translation regulator activity 4.79814772079421 bayes_pls_golite062009
actin binding 2.84620358490972 bayes_pls_golite062009
cytoskeletal protein binding 2.66896300219871 bayes_pls_golite062009
binding 2.64537357529343 bayes_pls_golite062009
hydrolase activity 2.55157966585974 bayes_pls_golite062009
actin filament binding 2.1683792904715 bayes_pls_golite062009
motor activity 1.64238426331767 bayes_pls_golite062009
nucleic acid binding 1.49633029954726 bayes_pls_golite062009
purine ribonucleotide binding 1.2935968641033 bayes_pls_golite062009
ribonucleotide binding 1.2935353851804 bayes_pls_golite062009
purine nucleotide binding 1.29138695385133 bayes_pls_golite062009
nucleotide binding 1.28669586915546 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
transcription regulator activity 0.989226939888218 bayes_pls_golite062009
ATP binding 0.98146619596929 bayes_pls_golite062009
DNA binding 0.967303417236485 bayes_pls_golite062009
adenyl ribonucleotide binding 0.949788783884952 bayes_pls_golite062009
adenyl nucleotide binding 0.931486373329219 bayes_pls_golite062009
protein methyltransferase activity 0.876296121718575 bayes_pls_golite062009
microtubule motor activity 0.87576779858246 bayes_pls_golite062009
structural constituent of ribosome 0.860102064846772 bayes_pls_golite062009
microfilament motor activity 0.842051467704019 bayes_pls_golite062009
RNA binding 0.715902454627085 bayes_pls_golite062009
kinase activity 0.691112783105676 bayes_pls_golite062009
histone methyltransferase activity 0.63002958837536 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.499834566483656 bayes_pls_golite062009
0.3172470686972 bayes_pls_golite062009
ribonuclease activity 0.222424272323909 bayes_pls_golite062009
protein binding 0.170837278876362 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.147579541298736 bayes_pls_golite062009
pyrophosphatase activity 0.133017653323467 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.113504049290503 bayes_pls_golite062009
structural molecule activity 0.11239762372728 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.111293884322157 bayes_pls_golite062009
helicase activity 0.0775311459068899 bayes_pls_golite062009
transcription factor activity 0.0434163635422169 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.0430764033739892 bayes_pls_golite062009
protein kinase activity 0.0364322017534667 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [432-635]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FALRRADNIH WQHTDVTKVS RAALKRQRGQ VVWLTGLSGA GKSTIANLVE KRLHALGRHT  60
   61 YLLDGDNVRH GLNKDLGFTE EDRVENIRRV AEVAKLMVDA GLIVLTAFIS PFRAERQLAR 120
  121 DLLEPGEFIE VFVDTPLAVA EARDVKGLYK KARSGQLKNF TGVDSPYEAP ESPELRIDTT 180
  181 AIDPVEAAER IVAWLEGQEI DYTI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.522879
Match: 1x6vB
Description: The crystal structure of human 3'-phosphoadenosine-5'-phosphosulfate synthetase 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
translation elongation factor activity 8.90683166637832 bayes_pls_golite062009
translation factor activity, nucleic acid binding 4.8378725567094 bayes_pls_golite062009
translation regulator activity 4.79814772079421 bayes_pls_golite062009
actin binding 2.84620358490972 bayes_pls_golite062009
cytoskeletal protein binding 2.66896300219871 bayes_pls_golite062009
binding 2.64537357529343 bayes_pls_golite062009
hydrolase activity 2.55157966585974 bayes_pls_golite062009
actin filament binding 2.1683792904715 bayes_pls_golite062009
motor activity 1.64238426331767 bayes_pls_golite062009
nucleic acid binding 1.49633029954726 bayes_pls_golite062009
purine ribonucleotide binding 1.2935968641033 bayes_pls_golite062009
ribonucleotide binding 1.2935353851804 bayes_pls_golite062009
purine nucleotide binding 1.29138695385133 bayes_pls_golite062009
nucleotide binding 1.28669586915546 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
transcription regulator activity 0.989226939888218 bayes_pls_golite062009
ATP binding 0.98146619596929 bayes_pls_golite062009
DNA binding 0.967303417236485 bayes_pls_golite062009
adenyl ribonucleotide binding 0.949788783884952 bayes_pls_golite062009
adenyl nucleotide binding 0.931486373329219 bayes_pls_golite062009
protein methyltransferase activity 0.876296121718575 bayes_pls_golite062009
microtubule motor activity 0.87576779858246 bayes_pls_golite062009
structural constituent of ribosome 0.860102064846772 bayes_pls_golite062009
microfilament motor activity 0.842051467704019 bayes_pls_golite062009
RNA binding 0.715902454627085 bayes_pls_golite062009
kinase activity 0.691112783105676 bayes_pls_golite062009
histone methyltransferase activity 0.63002958837536 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.499834566483656 bayes_pls_golite062009
0.3172470686972 bayes_pls_golite062009
ribonuclease activity 0.222424272323909 bayes_pls_golite062009
protein binding 0.170837278876362 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.147579541298736 bayes_pls_golite062009
pyrophosphatase activity 0.133017653323467 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.113504049290503 bayes_pls_golite062009
structural molecule activity 0.11239762372728 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.111293884322157 bayes_pls_golite062009
helicase activity 0.0775311459068899 bayes_pls_golite062009
transcription factor activity 0.0434163635422169 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.0430764033739892 bayes_pls_golite062009
protein kinase activity 0.0364322017534667 bayes_pls_golite062009

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