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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Afg3. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

m-AAA complex 9.5344E-4 3 2 1 6292
mitochondrial oxoglutarate dehydrogenase complex 1.4299E-3 3 3 1 6292
oxoglutarate dehydrogenase complex 1.4299E-3 3 3 1 6292
pyruvate dehydrogenase complex 2.8585E-3 3 6 1 6292
glycine cleavage complex 2.8585E-3 3 6 1 6292
mitochondrial pyruvate dehydrogenase complex 2.8585E-3 3 6 1 6292
preribosome, small subunit precursor 2.8585E-3 3 6 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

valine catabolic process 4.768E-4 3 1 1 6292
valine metabolic process 4.768E-4 3 1 1 6292
isoleucine catabolic process 4.768E-4 3 1 1 6292
L-serine metabolic process 9.5344E-4 3 2 1 6292
L-serine biosynthetic process 9.5344E-4 3 2 1 6292
leucine catabolic process 9.5344E-4 3 2 1 6292
acetyl-CoA biosynthetic process from pyruvate 9.5344E-4 3 2 1 6292
isoleucine metabolic process 1.4299E-3 3 3 1 6292
acetyl-CoA biosynthetic process 1.9063E-3 3 4 1 6292
branched chain family amino acid catabolic process 1.9063E-3 3 4 1 6292
glycine catabolic process 2.8585E-3 3 6 1 6292
protein maturation by peptide bond cleavage 3.3344E-3 3 7 1 6292
signal peptide processing 3.3344E-3 3 7 1 6292
glycine metabolic process 3.8101E-3 3 8 1 6292
leucine metabolic process 3.8101E-3 3 8 1 6292
protein import into mitochondrial intermembrane space 3.8101E-3 3 8 1 6292
serine family amino acid catabolic process 3.8101E-3 3 8 1 6292
serine family amino acid biosynthetic process 5.7116E-3 3 12 1 6292
branched chain family amino acid metabolic process 8.5592E-3 3 18 1 6292
acetyl-CoA metabolic process 9.5071E-3 3 20 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

dihydrolipoyl dehydrogenase activity 4.768E-4 3 1 1 6292
oxoglutarate dehydrogenase (succinyl-transferring) activity 9.5344E-4 3 2 1 6292
pyruvate dehydrogenase (acetyl-transferring) activity 1.9063E-3 3 4 1 6292
pyruvate dehydrogenase activity 1.9063E-3 3 4 1 6292
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor 2.3825E-3 3 5 1 6292
glycine dehydrogenase (decarboxylating) activity 2.8585E-3 3 6 1 6292
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 2.8585E-3 3 6 1 6292
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 3.3344E-3 3 7 1 6292
oxidoreductase activity, acting on the CH-NH2 group of donors 5.7116E-3 3 12 1 6292
metallopeptidase activity 7.6106E-3 3 16 1 6292
oxidoreductase activity, acting on sulfur group of donors 9.5071E-3 3 20 1 6292
oxidoreductase activity, acting on NADH or NADPH 9.9809E-3 3 21 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle