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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Rlf2. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 3 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

chromatin assembly complex 5.7116E-3 3 12 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

pore complex assembly 4.768E-4 3 1 1 6292
nuclear pore complex assembly 4.768E-4 3 1 1 6292
nuclear transport 1.2538E-3 3 130 2 6292
nucleocytoplasmic transport 1.2538E-3 3 130 2 6292
cellular macromolecular complex assembly 2.449E-3 3 182 2 6292
cellular macromolecular complex subunit organization 4.9265E-3 3 259 2 6292
macromolecular complex assembly 5.7868E-3 3 281 2 6292
nucleosome assembly 7.6106E-3 3 16 1 6292
chromatin assembly 9.0332E-3 3 19 1 6292
macromolecular complex subunit organization 9.2699E-3 3 357 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein transmembrane transporter activity 5.4528E-6 3 9 2 6292
macromolecule transmembrane transporter activity 5.4528E-6 3 9 2 6292
protein transporter activity 2.4908E-4 3 58 2 6292
substrate-specific transmembrane transporter activity 5.2316E-3 3 267 2 6292
transmembrane transporter activity 6.8456E-3 3 306 2 6292
substrate-specific transporter activity 8.2289E-3 3 336 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle