YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Pat1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytoplasmic mRNA processing body 3.1295E-10 6 15 4 6292
ribonucleoprotein complex 1.9994E-5 6 514 5 6292
mRNA cap binding complex 2.8585E-3 6 3 1 6292
macromolecular complex 5.5477E-3 6 1635 5 6292
RNA cap binding complex 5.7102E-3 6 6 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

deadenylation-dependent decapping of nuclear-transcribed mRNA 7.5736E-11 6 11 4 6292
mRNA catabolic process 8.1487E-10 6 69 5 6292
RNA catabolic process 1.7405E-9 6 80 5 6292
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 4.0114E-9 6 27 4 6292
nuclear-transcribed mRNA catabolic process 1.6824E-8 6 38 4 6292
mRNA metabolic process 2.4781E-7 6 213 5 6292
cellular macromolecule catabolic process 7.4031E-7 6 265 5 6292
macromolecule catabolic process 1.244E-6 6 294 5 6292
cellular catabolic process 6.9242E-6 6 415 5 6292
catabolic process 1.6761E-5 6 496 5 6292
RNA metabolic process 4.1658E-4 6 954 5 6292
nuclear-transcribed mRNA catabolic process, deadenylation-independent decay 1.9064E-3 6 2 1 6292
deadenylation-independent decapping of nuclear-transcribed mRNA 1.9064E-3 6 2 1 6292
cellular macromolecule metabolic process 2.2844E-3 6 2285 6 6292
macromolecule metabolic process 2.6967E-3 6 2349 6 6292
nucleic acid metabolic process 2.791E-3 6 1415 5 6292
protein import into peroxisome membrane 2.8585E-3 6 3 1 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 4.5228E-3 6 1566 5 6292
cellular nitrogen compound metabolic process 8.0643E-3 6 1770 5 6292
nitrogen compound metabolic process 8.5237E-3 6 1791 5 6292
primary metabolic process 9.4808E-3 6 2896 6 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

binding 1.819E-3 6 1294 5 6292
RNA cap binding 1.9064E-3 6 2 1 6292
RNA binding 3.4488E-3 6 367 3 6292
m7G(5')pppN diphosphatase activity 4.7604E-3 6 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle