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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Smk1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondrial respiratory chain complex III 6.3341E-5 8 10 2 6292
respiratory chain complex III 6.3341E-5 8 10 2 6292
mitochondrial respiratory chain 4.5282E-4 8 26 2 6292
respiratory chain 4.5282E-4 8 26 2 6292
mitochondrial membrane part 6.579E-3 8 100 2 6292
proteasome core complex, beta-subunit complex 8.8705E-3 8 7 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

phosphorylation 1.1411E-3 8 179 3 6292
cell wall organization or biogenesis 1.7634E-3 8 208 3 6292
cellular cell wall organization or biogenesis 1.7634E-3 8 208 3 6292
phosphorus metabolic process 2.3265E-3 8 229 3 6292
phosphate metabolic process 2.3265E-3 8 229 3 6292
negative regulation of developmental process 2.5415E-3 8 2 1 6292
regulation of sporulation 2.5415E-3 8 2 1 6292
negative regulation of sporulation 2.5415E-3 8 2 1 6292
regulation of sporulation resulting in formation of a cellular spore 2.5415E-3 8 2 1 6292
negative regulation of sporulation resulting in formation of a cellular spore 2.5415E-3 8 2 1 6292
regulation of cell differentiation 2.5415E-3 8 2 1 6292
negative regulation of cell differentiation 2.5415E-3 8 2 1 6292
cellular metabolic process 2.9013E-3 8 3033 8 6292
anatomical structure morphogenesis 3.2376E-3 8 257 3 6292
anatomical structure development 3.3466E-3 8 260 3 6292
cellular developmental process 3.967E-3 8 276 3 6292
metabolic process 3.9991E-3 8 3157 8 6292
cell wall biogenesis 4.2539E-3 8 80 2 6292
aerobic respiration 4.5722E-3 8 83 2 6292
cellular respiration 6.2001E-3 8 97 2 6292
galactose catabolic process 6.3431E-3 8 5 1 6292
developmental process 6.628E-3 8 331 3 6292
protein amino acid phosphorylation 6.9683E-3 8 103 2 6292
sexual sporulation 8.1985E-3 8 112 2 6292
sexual sporulation resulting in formation of a cellular spore 8.1985E-3 8 112 2 6292
cell development 8.1985E-3 8 112 2 6292
ascospore formation 8.1985E-3 8 112 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

MAP kinase activity 1.4121E-5 8 5 2 6292
ubiquinol-cytochrome-c reductase activity 5.0705E-5 8 9 2 6292
oxidoreductase activity, acting on diphenols and related substances as donors 5.0705E-5 8 9 2 6292
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor 5.0705E-5 8 9 2 6292
receptor signaling protein serine/threonine kinase activity 8.7221E-4 8 36 2 6292
receptor signaling protein activity 9.2146E-4 8 37 2 6292
chaperone inhibitor activity 1.2715E-3 8 1 1 6292
UTP:galactose-1-phosphate uridylyltransferase activity 1.2715E-3 8 1 1 6292
hydrogen ion transmembrane transporter activity 1.9586E-3 8 54 2 6292
monovalent inorganic cation transmembrane transporter activity 2.3343E-3 8 59 2 6292
UTP-monosaccharide-1-phosphate uridylyltransferase activity 2.5415E-3 8 2 1 6292
Hsp70 protein binding 2.5415E-3 8 2 1 6292
Hsp90 protein binding 2.5415E-3 8 2 1 6292
chaperone activator activity 3.8101E-3 8 3 1 6292
uridylyltransferase activity 3.8101E-3 8 3 1 6292
heat shock protein binding 3.8101E-3 8 3 1 6292
molecular transducer activity 4.2539E-3 8 80 2 6292
signal transducer activity 4.2539E-3 8 80 2 6292
protein serine/threonine kinase activity 5.474E-3 8 91 2 6292
inorganic cation transmembrane transporter activity 6.7076E-3 8 101 2 6292
cation transmembrane transporter activity 9.0698E-3 8 118 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle