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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Rfa2. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mitochondrial chromosome 1.2712E-3 4 2 1 6292
cytoplasmic chromosome 1.2712E-3 4 2 1 6292
DNA replication factor A complex 1.9063E-3 4 3 1 6292
HIR complex 3.1756E-3 4 5 1 6292
cellular bud neck septin ring 5.7106E-3 4 9 1 6292
cleavage apparatus septin structure 5.7106E-3 4 9 1 6292
cellular bud neck septin structure 5.7106E-3 4 9 1 6292
chromatin assembly complex 7.6087E-3 4 12 1 6292
septin cytoskeleton 9.5041E-3 4 15 1 6292
septin ring 9.5041E-3 4 15 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

DNA conformation change 4.952E-4 4 58 2 6292
cellular response to stimulus 8.288E-4 4 379 3 6292
DNA replication, synthesis of RNA primer 3.1756E-3 4 5 1 6292
DNA replication-independent nucleosome assembly 3.8098E-3 4 6 1 6292
DNA replication-independent nucleosome organization 3.8098E-3 4 6 1 6292
DNA repair 5.3374E-3 4 192 2 6292
response to stimulus 6.5381E-3 4 766 3 6292
response to DNA damage stimulus 7.9954E-3 4 236 2 6292
DNA unwinding involved in replication 8.8726E-3 4 14 1 6292
regulation of transcription involved in G1/S-phase of mitotic cell cycle 8.8726E-3 4 14 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

binding 1.7823E-3 4 1294 4 6292
phosphatidylinositol binding 6.3436E-3 4 10 1 6292
DNA binding 9.3704E-3 4 256 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle