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View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Nop13. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleolus 3.5107E-8 8 211 6 6292
organelle lumen 9.8757E-7 8 660 7 6292
intracellular organelle lumen 9.8757E-7 8 660 7 6292
membrane-enclosed lumen 1.4845E-6 8 700 7 6292
nuclear lumen 3.3344E-6 8 453 6 6292
non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
intracellular non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
nuclear part 5.8147E-4 8 1103 6 6292
Noc2p-Noc3p complex 2.5415E-3 8 2 1 6292
Noc1p-Noc2p complex 2.5415E-3 8 2 1 6292
organelle part 4.4856E-3 8 2282 7 6292
intracellular organelle part 4.4856E-3 8 2282 7 6292
eukaryotic translation initiation factor 4F complex 5.0773E-3 8 4 1 6292
Noc complex 6.3431E-3 8 5 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosome biogenesis 1.094E-8 8 346 7 6292
ribonucleoprotein complex biogenesis 1.8872E-8 8 374 7 6292
cellular component biogenesis 1.3986E-6 8 694 7 6292
regulation of transcription, mating-type specific 6.3431E-3 8 5 1 6292
RNA processing 9.7426E-3 8 380 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleic acid binding 5.58E-4 8 666 5 6292
RNA binding 6.6069E-4 8 367 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle