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View Protein Complex Details

Complex Overview

From Publication: Mewes, H. W. et al. MIPS: Analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44
Notes: MIPS hand-curated complex set. MIPS complex ID: 440.12.20
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleolar ribonuclease P complex 1.4838E-25 8 9 8 6292
multimeric ribonuclease P complex 1.4838E-25 8 9 8 6292
ribonuclease MRP complex 7.4192E-25 8 10 8 6292
ribonuclease P complex 7.4192E-25 8 10 8 6292
nucleolar part 3.5538E-18 8 45 8 6292
small nucleolar ribonucleoprotein complex 1.9733E-16 8 72 8 6292
nucleolus 1.4046E-12 8 211 8 6292
nuclear lumen 6.8142E-10 8 453 8 6292
ribonucleoprotein complex 1.8861E-9 8 514 8 6292
organelle lumen 1.4108E-8 8 660 8 6292
intracellular organelle lumen 1.4108E-8 8 660 8 6292
membrane-enclosed lumen 2.2645E-8 8 700 8 6292
non-membrane-bounded organelle 2.8409E-7 8 959 8 6292
intracellular non-membrane-bounded organelle 2.8409E-7 8 959 8 6292
nuclear part 8.7333E-7 8 1103 8 6292
macromolecular complex 2.0527E-5 8 1635 8 6292
nucleus 1.2145E-4 8 2041 8 6292
organelle part 2.9704E-4 8 2282 8 6292
intracellular organelle part 2.9704E-4 8 2282 8 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA cleavage 1.7832E-20 8 25 8 6292
nucleic acid phosphodiester bond hydrolysis 4.302E-18 8 46 8 6292
tRNA processing 6.503E-16 8 83 8 6292
tRNA metabolic process 1.3853E-14 8 120 8 6292
rRNA processing 2.3572E-14 8 128 8 6292
rRNA metabolic process 4.1206E-14 8 137 8 6292
mRNA processing 1.1951E-13 8 156 8 6292
mRNA metabolic process 1.5167E-12 8 213 8 6292
ncRNA processing 1.6365E-12 8 215 8 6292
ncRNA metabolic process 6.9712E-12 8 257 8 6292
ribosome biogenesis 7.7416E-11 8 346 8 6292
ribonucleoprotein complex biogenesis 1.4517E-10 8 374 8 6292
RNA processing 1.6507E-10 8 380 8 6292
cellular component biogenesis 2.1131E-8 8 694 8 6292
RNA metabolic process 2.7241E-7 8 954 8 6292
gene expression 2.9372E-6 8 1283 8 6292
nucleic acid metabolic process 6.4427E-6 8 1415 8 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 1.4527E-5 8 1566 8 6292
cellular nitrogen compound metabolic process 3.8773E-5 8 1770 8 6292
nitrogen compound metabolic process 4.2618E-5 8 1791 8 6292
cellular macromolecule metabolic process 3.0018E-4 8 2285 8 6292
macromolecule metabolic process 3.7455E-4 8 2349 8 6292
primary metabolic process 2.0036E-3 8 2896 8 6292
cellular metabolic process 2.9013E-3 8 3033 8 6292
metabolic process 3.9991E-3 8 3157 8 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonuclease P activity 7.4192E-25 8 10 8 6292
ribonuclease MRP activity 7.4192E-25 8 10 8 6292
tRNA-specific ribonuclease activity 1.0609E-22 8 15 8 6292
endoribonuclease activity, producing 5'-phosphomonoesters 7.2144E-22 8 18 8 6292
endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 8.0839E-21 8 23 8 6292
endoribonuclease activity 3.6603E-20 8 27 8 6292
endonuclease activity 4.8552E-17 8 61 8 6292
ribonuclease activity 8.2053E-14 8 149 8 6292
nuclease activity 8.7209E-13 8 199 8 6292
hydrolase activity, acting on ester bonds 6.8823E-11 8 341 8 6292
hydrolase activity 1.881E-7 8 911 8 6292
catalytic activity 1.8428E-4 8 2150 8 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle