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View Protein Complex Details

Complex Overview

From Publication: Mewes, H. W. et al. MIPS: Analysis and annotation of proteins from whole genomes. Nucleic Acids Res. 32, D41-D44
Notes: MIPS hand-curated complex set. MIPS complex ID: 200
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glycine cleavage complex 2.2991E-13 4 6 4 6292
mitochondrion 1.0175E-3 4 1125 4 6292
protein complex 1.0617E-3 4 1137 4 6292
mitochondrial oxoglutarate dehydrogenase complex 1.9063E-3 4 3 1 6292
oxoglutarate dehydrogenase complex 1.9063E-3 4 3 1 6292
mitochondrial pyruvate dehydrogenase complex 3.8098E-3 4 6 1 6292
pyruvate dehydrogenase complex 3.8098E-3 4 6 1 6292
macromolecular complex 4.5471E-3 4 1635 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glycine catabolic process 2.2991E-13 4 6 4 6292
serine family amino acid catabolic process 1.0729E-12 4 8 4 6292
glycine metabolic process 1.0729E-12 4 8 4 6292
serine family amino acid metabolic process 2.69E-10 4 27 4 6292
cellular amino acid catabolic process 4.2005E-10 4 30 4 6292
amine catabolic process 6.272E-10 4 33 4 6292
organic acid catabolic process 1.7156E-9 4 42 4 6292
carboxylic acid catabolic process 1.7156E-9 4 42 4 6292
small molecule catabolic process 1.4854E-7 4 125 4 6292
cellular amino acid metabolic process 9.7163E-7 4 199 4 6292
cellular amine metabolic process 1.5096E-6 4 222 4 6292
amine metabolic process 2.1722E-6 4 243 4 6292
cellular amino acid and derivative metabolic process 2.1722E-6 4 243 4 6292
one-carbon metabolic process 2.5132E-6 4 55 3 6292
organic acid metabolic process 7.7123E-6 4 333 4 6292
oxoacid metabolic process 7.7123E-6 4 333 4 6292
carboxylic acid metabolic process 7.7123E-6 4 333 4 6292
cellular ketone metabolic process 8.9951E-6 4 346 4 6292
cellular catabolic process 1.867E-5 4 415 4 6292
catabolic process 3.8187E-5 4 496 4 6292
small molecule metabolic process 2.1139E-4 4 760 4 6292
valine catabolic process 6.3573E-4 4 1 1 6292
valine metabolic process 6.3573E-4 4 1 1 6292
isoleucine catabolic process 6.3573E-4 4 1 1 6292
acetyl-CoA biosynthetic process from pyruvate 1.2712E-3 4 2 1 6292
L-serine metabolic process 1.2712E-3 4 2 1 6292
L-serine biosynthetic process 1.2712E-3 4 2 1 6292
leucine catabolic process 1.2712E-3 4 2 1 6292
isoleucine metabolic process 1.9063E-3 4 3 1 6292
acetyl-CoA biosynthetic process 2.5411E-3 4 4 1 6292
branched chain family amino acid catabolic process 2.5411E-3 4 4 1 6292
leucine metabolic process 5.0773E-3 4 8 1 6292
cellular nitrogen compound metabolic process 6.2471E-3 4 1770 4 6292
nitrogen compound metabolic process 6.5492E-3 4 1791 4 6292
serine family amino acid biosynthetic process 7.6087E-3 4 12 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

glycine dehydrogenase (decarboxylating) activity 2.2991E-13 4 6 4 6292
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 2.2991E-13 4 6 4 6292
oxidoreductase activity, acting on the CH-NH2 group of donors 7.5871E-12 4 12 4 6292
oxidoreductase activity 3.8974E-6 4 281 4 6292
dihydrolipoyl dehydrogenase activity 6.3573E-4 4 1 1 6292
oxoglutarate dehydrogenase (succinyl-transferring) activity 1.2712E-3 4 2 1 6292
pyruvate dehydrogenase (acetyl-transferring) activity 2.5411E-3 4 4 1 6292
pyruvate dehydrogenase activity 2.5411E-3 4 4 1 6292
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor 3.1756E-3 4 5 1 6292
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 4.4437E-3 4 7 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle