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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

alpha-1,6-mannosyltransferase complex 4.5436E-6 4 6 2 6292
mannosyltransferase complex 4.5436E-6 4 6 2 6292
Golgi cis cisterna 1.3619E-5 4 10 2 6292
Golgi stack 3.6271E-5 4 16 2 6292
Golgi cisterna 3.6271E-5 4 16 2 6292
organelle subcompartment 3.6271E-5 4 16 2 6292
1,3-beta-glucan synthase complex 1.9063E-3 4 3 1 6292
Golgi apparatus part 2.0761E-3 4 119 2 6292
Golgi apparatus 4.2502E-3 4 171 2 6292
actin cap 7.6087E-3 4 12 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cellular carbohydrate metabolic process 2.7682E-4 4 262 3 6292
carbohydrate metabolic process 3.4098E-4 4 281 3 6292
protein amino acid N-linked glycosylation 3.5297E-4 4 49 2 6292
cellular polysaccharide metabolic process 4.4515E-4 4 55 2 6292
polysaccharide metabolic process 5.3002E-4 4 60 2 6292
macromolecule glycosylation 8.2831E-4 4 75 2 6292
protein amino acid glycosylation 8.2831E-4 4 75 2 6292
glycosylation 8.2831E-4 4 75 2 6292
glycoprotein biosynthetic process 9.6587E-4 4 81 2 6292
glycoprotein metabolic process 1.014E-3 4 83 2 6292
mannan metabolic process 1.2712E-3 4 2 1 6292
hemicellulose metabolic process 1.2712E-3 4 2 1 6292
substituted mannan metabolic process 1.2712E-3 4 2 1 6292
barrier septum formation 1.9063E-3 4 3 1 6292
N-glycan processing 2.5411E-3 4 4 1 6292
negative regulation of proteolysis 2.5411E-3 4 4 1 6292
1,3-beta-glucan biosynthetic process 2.5411E-3 4 4 1 6292
1,3-beta-glucan metabolic process 2.5411E-3 4 4 1 6292
beta-glucan biosynthetic process 5.0773E-3 4 8 1 6292
regulation of proteolysis 5.0773E-3 4 8 1 6292
beta-glucan metabolic process 5.7106E-3 4 9 1 6292
cell wall organization or biogenesis 6.2449E-3 4 208 2 6292
cellular cell wall organization or biogenesis 6.2449E-3 4 208 2 6292
cell wall polysaccharide metabolic process 7.6087E-3 4 12 1 6292
mannoprotein biosynthetic process 8.2408E-3 4 13 1 6292
mannoprotein metabolic process 8.2408E-3 4 13 1 6292
cell wall glycoprotein biosynthetic process 8.2408E-3 4 13 1 6292
cell wall mannoprotein biosynthetic process 8.2408E-3 4 13 1 6292
negative regulation of cellular protein metabolic process 9.5041E-3 4 15 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

alpha-1,6-mannosyltransferase activity 4.5436E-6 4 6 2 6292
transferase activity, transferring hexosyl groups 7.847E-6 4 80 3 6292
transferase activity, transferring glycosyl groups 1.7342E-5 4 104 3 6292
mannosyltransferase activity 2.7138E-4 4 43 2 6292
1,3-beta-glucan synthase activity 1.9063E-3 4 3 1 6292
transferase activity 7.3356E-3 4 797 3 6292
UDP-glucosyltransferase activity 8.8726E-3 4 14 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle