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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 4 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleolar ribonuclease P complex 1.9313E-12 4 9 4 6292
multimeric ribonuclease P complex 1.9313E-12 4 9 4 6292
ribonuclease MRP complex 3.2188E-12 4 10 4 6292
ribonuclease P complex 3.2188E-12 4 10 4 6292
nucleolar part 2.2837E-9 4 45 4 6292
small nucleolar ribonucleoprotein complex 1.5769E-8 4 72 4 6292
nucleolus 1.2302E-6 4 211 4 6292
nuclear lumen 2.6539E-5 4 453 4 6292
ribonucleoprotein complex 4.4059E-5 4 514 4 6292
organelle lumen 1.2008E-4 4 660 4 6292
intracellular organelle lumen 1.2008E-4 4 660 4 6292
membrane-enclosed lumen 1.5203E-4 4 700 4 6292
non-membrane-bounded organelle 5.368E-4 4 959 4 6292
intracellular non-membrane-bounded organelle 5.368E-4 4 959 4 6292
nuclear part 9.4015E-4 4 1103 4 6292
macromolecular complex 4.5471E-3 4 1635 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

mRNA cleavage 1.9389E-10 4 25 4 6292
nucleic acid phosphodiester bond hydrolysis 2.5012E-9 4 46 4 6292
tRNA processing 2.8166E-8 4 83 4 6292
tRNA metabolic process 1.2591E-7 4 120 4 6292
rRNA processing 1.6351E-7 4 128 4 6292
rRNA metabolic process 2.1526E-7 4 137 4 6292
mRNA processing 3.6385E-7 4 156 4 6292
mRNA metabolic process 1.2778E-6 4 213 4 6292
ncRNA processing 1.3269E-6 4 215 4 6292
ncRNA metabolic process 2.7215E-6 4 257 4 6292
ribosome biogenesis 8.9951E-6 4 346 4 6292
ribonucleoprotein complex biogenesis 1.2296E-5 4 374 4 6292
RNA processing 1.3107E-5 4 380 4 6292
cellular component biogenesis 1.4687E-4 4 694 4 6292
RNA metabolic process 5.2568E-4 4 954 4 6292
gene expression 1.7224E-3 4 1283 4 6292
nucleic acid metabolic process 2.5494E-3 4 1415 4 6292
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process 3.8261E-3 4 1566 4 6292
cellular nitrogen compound metabolic process 6.2471E-3 4 1770 4 6292
nitrogen compound metabolic process 6.5492E-3 4 1791 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribonuclease P activity 3.2188E-12 4 10 4 6292
ribonuclease MRP activity 3.2188E-12 4 10 4 6292
tRNA-specific ribonuclease activity 2.0922E-11 4 15 4 6292
endoribonuclease activity, producing 5'-phosphomonoesters 4.6902E-11 4 18 4 6292
endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 1.3572E-10 4 23 4 6292
endoribonuclease activity 2.69E-10 4 27 4 6292
endonuclease activity 7.9987E-9 4 61 4 6292
ribonuclease activity 3.0226E-7 4 149 4 6292
nuclease activity 9.7163E-7 4 199 4 6292
hydrolase activity, acting on ester bonds 8.4842E-6 4 341 4 6292
hydrolase activity 4.3699E-4 4 911 4 6292

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Created and Maintained by: Michael Riffle