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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

signal recognition particle 5.6987E-19 7 7 6 6292
signal recognition particle, endoplasmic reticulum targeting 5.6987E-19 7 7 6 6292
ribonucleoprotein complex 1.8849E-6 7 514 6 6292
macromolecular complex 1.6651E-3 7 1635 6 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition 5.6987E-19 7 7 6 6292
SRP-dependent cotranslational protein targeting to membrane 4.4092E-15 7 21 6 6292
cotranslational protein targeting to membrane 1.0932E-14 7 24 6 6292
protein targeting to ER 8.9847E-14 7 33 6 6292
protein localization in endoplasmic reticulum 3.1107E-13 7 40 6 6292
protein targeting to membrane 1.6472E-12 7 52 6 6292
cellular protein complex assembly 2.0891E-12 7 54 6 6292
protein localization in organelle 1.0957E-9 7 149 6 6292
protein complex biogenesis 1.393E-9 7 155 6 6292
protein complex assembly 1.393E-9 7 155 6 6292
cellular macromolecular complex assembly 3.6908E-9 7 182 6 6292
protein targeting 1.7302E-8 7 235 6 6292
intracellular protein transport 2.8308E-8 7 255 6 6292
cellular macromolecular complex subunit organization 3.109E-8 7 259 6 6292
protein transport 3.9054E-8 7 269 6 6292
establishment of protein localization 4.0835E-8 7 271 6 6292
cellular protein localization 4.3632E-8 7 274 6 6292
macromolecular complex assembly 5.0781E-8 7 281 6 6292
cellular macromolecule localization 5.413E-8 7 284 6 6292
protein localization 7.9886E-8 7 303 6 6292
macromolecular complex subunit organization 2.1368E-7 7 357 6 6292
cellular component assembly 3.3583E-7 7 385 6 6292
macromolecule localization 4.0352E-7 7 397 6 6292
intracellular transport 2.9125E-6 7 553 6 6292
establishment of localization in cell 4.682E-6 7 599 6 6292
cellular localization 7.1293E-6 7 643 6 6292
cellular component biogenesis 1.1204E-5 7 694 6 6292
transport 9.4619E-5 7 997 6 6292
establishment of localization 1.009E-4 7 1008 6 6292
localization 1.3542E-4 7 1060 6 6292
cellular component organization 1.3786E-3 7 1582 6 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

peptide binding 2.1854E-12 7 18 5 6292
signal sequence binding 2.1854E-12 7 18 5 6292
binding 4.326E-4 7 1294 6 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle