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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic large ribosomal subunit 1.6159E-5 6 60 3 6292
cytosolic ribosome 7.7539E-5 6 101 3 6292
large ribosomal subunit 1.0009E-4 6 110 3 6292
cytosolic part 1.3633E-4 6 122 3 6292
ribosomal subunit 4.5377E-4 6 183 3 6292
ribonucleoprotein complex 5.7801E-4 6 514 4 6292
cytosol 1.644E-3 6 284 3 6292
ribosome 1.747E-3 6 290 3 6292
non-membrane-bounded organelle 6.2191E-3 6 959 4 6292
intracellular non-membrane-bounded organelle 6.2191E-3 6 959 4 6292
preribosome, large subunit precursor 8.5551E-3 6 9 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosomal large subunit biogenesis 2.0589E-5 6 65 3 6292
translation 1.7103E-4 6 376 4 6292
ribosome biogenesis 2.9111E-3 6 346 3 6292
ribonucleoprotein complex biogenesis 3.641E-3 6 374 3 6292
cellular protein metabolic process 9.4683E-3 6 1074 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.7826E-5 6 212 4 6292
structural molecule activity 1.1393E-4 6 339 4 6292
RNA binding 3.4488E-3 6 367 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle