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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

nucleolus 2.0872E-6 8 211 5 6292
nuclear lumen 3.3344E-6 8 453 6 6292
non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
intracellular non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
organelle lumen 3.0323E-5 8 660 6 6292
intracellular organelle lumen 3.0323E-5 8 660 6 6292
membrane-enclosed lumen 4.2703E-5 8 700 6 6292
organelle part 2.9704E-4 8 2282 8 6292
intracellular organelle part 2.9704E-4 8 2282 8 6292
nuclear part 5.8147E-4 8 1103 6 6292
cytosolic large ribosomal subunit 2.4133E-3 8 60 2 6292
nuclear outer membrane 4.9014E-3 8 86 2 6292
nuclear membrane 6.2001E-3 8 97 2 6292
cytosolic ribosome 6.7076E-3 8 101 2 6292
large ribosomal subunit 7.9172E-3 8 110 2 6292
cytosolic part 9.6731E-3 8 122 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosomal large subunit biogenesis 5.5041E-9 8 65 5 6292
ribosome biogenesis 1.094E-8 8 346 7 6292
ribonucleoprotein complex biogenesis 1.8872E-8 8 374 7 6292
cellular component biogenesis 1.3986E-6 8 694 7 6292
establishment of ribosome localization 3.4609E-6 8 26 3 6292
ribosome localization 3.4609E-6 8 26 3 6292
ribosomal subunit export from nucleus 3.4609E-6 8 26 3 6292
establishment of organelle localization 3.4321E-5 8 55 3 6292
organelle localization 1.2691E-4 8 85 3 6292
nuclear export 2.2479E-4 8 103 3 6292
nuclear transport 4.474E-4 8 130 3 6292
nucleocytoplasmic transport 4.474E-4 8 130 3 6292
ribosome assembly 2.7417E-3 8 64 2 6292
organelle assembly 3.1803E-3 8 69 2 6292
ribonucleoprotein complex assembly 5.5921E-3 8 92 2 6292
cell proliferation 6.3431E-3 8 5 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosomal large subunit binding 1.2715E-3 8 1 1 6292
GTPase activity 2.4935E-3 8 61 2 6292
ribonucleoprotein binding 8.8705E-3 8 7 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle