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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
intracellular non-membrane-bounded organelle 1.3016E-5 8 959 7 6292
cytosolic large ribosomal subunit 4.4633E-5 8 60 3 6292
nucleolus 7.7406E-5 8 211 4 6292
nuclear lumen 8.8346E-5 8 453 5 6292
cytosolic ribosome 2.1208E-4 8 101 3 6292
large ribosomal subunit 2.7317E-4 8 110 3 6292
organelle part 2.9704E-4 8 2282 8 6292
intracellular organelle part 2.9704E-4 8 2282 8 6292
cytosolic part 3.71E-4 8 122 3 6292
organelle lumen 5.3463E-4 8 660 5 6292
intracellular organelle lumen 5.3463E-4 8 660 5 6292
membrane-enclosed lumen 7.0576E-4 8 700 5 6292
ribosomal subunit 1.2169E-3 8 183 3 6292
ribonucleoprotein complex 2.361E-3 8 514 4 6292
cytosol 4.3023E-3 8 284 3 6292
ribosome 4.565E-3 8 290 3 6292
nuclear part 5.7545E-3 8 1103 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosome biogenesis 6.7573E-7 8 346 6 6292
ribosomal large subunit biogenesis 7.0413E-7 8 65 4 6292
ribonucleoprotein complex biogenesis 1.0727E-6 8 374 6 6292
cellular component biogenesis 4.0619E-5 8 694 6 6292
establishment of ribosome localization 4.5282E-4 8 26 2 6292
ribosome localization 4.5282E-4 8 26 2 6292
ribosomal subunit export from nucleus 4.5282E-4 8 26 2 6292
establishment of organelle localization 2.0312E-3 8 55 2 6292
ribosome assembly 2.7417E-3 8 64 2 6292
organelle assembly 3.1803E-3 8 69 2 6292
organelle localization 4.7905E-3 8 85 2 6292
ribonucleoprotein complex assembly 5.5921E-3 8 92 2 6292
cell proliferation 6.3431E-3 8 5 1 6292
nuclear export 6.9683E-3 8 103 2 6292
translation 9.4607E-3 8 376 3 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 1.8631E-3 8 212 3 6292
GTPase activity 2.4935E-3 8 61 2 6292
structural molecule activity 7.087E-3 8 339 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle