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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

cytosolic large ribosomal subunit 8.1348E-6 5 60 3 6292
cytosolic ribosome 3.9227E-5 5 101 3 6292
large ribosomal subunit 5.0691E-5 5 110 3 6292
cytosolic part 6.9145E-5 5 122 3 6292
ribonucleoprotein complex 2.06E-4 5 514 4 6292
ribosomal subunit 2.3185E-4 5 183 3 6292
cytosol 8.504E-4 5 284 3 6292
ribosome 9.043E-4 5 290 3 6292
non-membrane-bounded organelle 2.3579E-3 5 959 4 6292
intracellular non-membrane-bounded organelle 2.3579E-3 5 959 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 5.9837E-5 5 376 4 6292
gene expression 3.5034E-4 5 1283 5 6292
ribosomal large subunit assembly 4.092E-4 5 41 2 6292
ribosomal subunit assembly 7.3776E-4 5 55 2 6292
ribosome assembly 9.9868E-4 5 64 2 6292
ribosomal large subunit biogenesis 1.0301E-3 5 65 2 6292
organelle assembly 1.1603E-3 5 69 2 6292
ribosome biogenesis 1.5173E-3 5 346 3 6292
ribonucleoprotein complex biogenesis 1.9042E-3 5 374 3 6292
ribonucleoprotein complex assembly 2.0552E-3 5 92 2 6292
cellular protein metabolic process 3.6498E-3 5 1074 4 6292
protein metabolic process 4.528E-3 5 1136 4 6292
cellular macromolecule biosynthetic process 5.3579E-3 5 1187 4 6292
macromolecule biosynthetic process 5.3925E-3 5 1189 4 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292
cellular macromolecular complex assembly 7.856E-3 5 182 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 6.1033E-6 5 212 4 6292
structural molecule activity 3.9664E-5 5 339 4 6292
RNA binding 1.8021E-3 5 367 3 6292
rRNA primary transcript binding 3.9682E-3 5 5 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle