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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 5 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

90S preribosome 1.6332E-7 5 17 3 6292
preribosome 1.4314E-6 5 34 3 6292
cytosolic small ribosomal subunit 2.016E-6 5 38 3 6292
small ribosomal subunit 1.4739E-5 5 73 3 6292
cytosolic ribosome 3.9227E-5 5 101 3 6292
cytosolic part 6.9145E-5 5 122 3 6292
ribonucleoprotein complex 2.06E-4 5 514 4 6292
ribosomal subunit 2.3185E-4 5 183 3 6292
cytosol 8.504E-4 5 284 3 6292
ribosome 9.043E-4 5 290 3 6292
eukaryotic translation initiation factor 3 complex 5.552E-3 5 7 1 6292
multi-eIF complex 6.3431E-3 5 8 1 6292
cytoplasmic part 9.5281E-3 5 2482 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 7.4317E-7 5 376 5 6292
regulation of translation 6.9607E-6 5 57 3 6292
posttranscriptional regulation of gene expression 8.5535E-6 5 61 3 6292
regulation of cellular protein metabolic process 1.1891E-5 5 68 3 6292
regulation of protein metabolic process 1.5358E-5 5 74 3 6292
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 3.9273E-5 5 13 2 6292
cellular protein metabolic process 1.4379E-4 5 1074 5 6292
protein metabolic process 1.9046E-4 5 1136 5 6292
cellular macromolecule biosynthetic process 2.3732E-4 5 1187 5 6292
macromolecule biosynthetic process 2.3933E-4 5 1189 5 6292
gene expression 3.5034E-4 5 1283 5 6292
translational initiation 4.2953E-4 5 42 2 6292
maturation of SSU-rRNA 8.4895E-4 5 59 2 6292
cellular biosynthetic process 9.5349E-4 5 1567 5 6292
biosynthetic process 1.065E-3 5 1602 5 6292
regulation of gene expression 3.1553E-3 5 445 3 6292
regulation of macromolecule biosynthetic process 3.3863E-3 5 456 3 6292
regulation of cellular biosynthetic process 3.7412E-3 5 472 3 6292
regulation of biosynthetic process 3.7641E-3 5 473 3 6292
rRNA processing 3.9447E-3 5 128 2 6292
regulation of macromolecule metabolic process 4.1189E-3 5 488 3 6292
rRNA metabolic process 4.5082E-3 5 137 2 6292
regulation of primary metabolic process 4.783E-3 5 514 3 6292
regulation of cellular metabolic process 5.3949E-3 5 536 3 6292
regulation of metabolic process 5.7186E-3 5 547 3 6292
cellular macromolecule metabolic process 6.2991E-3 5 2285 5 6292
macromolecule metabolic process 7.2329E-3 5 2349 5 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

rRNA binding 6.0363E-5 5 16 2 6292
translation initiation factor activity 1.7594E-4 5 27 2 6292
structural constituent of ribosome 3.5873E-4 5 212 3 6292
translation factor activity, nucleic acid binding 4.7163E-4 5 44 2 6292
nucleic acid binding 5.7016E-4 5 666 4 6292
structural molecule activity 1.4293E-3 5 339 3 6292
binding 7.4489E-3 5 1294 4 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle