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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 6 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ribosome 6.1624E-5 6 290 4 6292
cytosolic ribosome 7.7539E-5 6 101 3 6292
90S preribosome 1.0242E-4 6 17 2 6292
cytosolic part 1.3633E-4 6 122 3 6292
preribosome 4.1945E-4 6 34 2 6292
non-membrane-bounded organelle 4.2731E-4 6 959 5 6292
intracellular non-membrane-bounded organelle 4.2731E-4 6 959 5 6292
ribosomal subunit 4.5377E-4 6 183 3 6292
cytosolic small ribosomal subunit 5.2472E-4 6 38 2 6292
ribonucleoprotein complex 5.7801E-4 6 514 4 6292
cytosol 1.644E-3 6 284 3 6292
small ribosomal subunit 1.9326E-3 6 73 2 6292
macromolecular complex 5.5477E-3 6 1635 5 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

translation 1.7103E-4 6 376 4 6292
negative regulation of programmed cell death 9.5359E-4 6 1 1 6292
anti-apoptosis 9.5359E-4 6 1 1 6292
negative regulation of cell death 9.5359E-4 6 1 1 6292
negative regulation of apoptosis 9.5359E-4 6 1 1 6292
regulation of programmed cell death 3.8098E-3 6 4 1 6292
regulation of apoptosis 3.8098E-3 6 4 1 6292
regulation of cell death 3.8098E-3 6 4 1 6292
cellular protein metabolic process 9.4683E-3 6 1074 4 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

structural constituent of ribosome 6.9964E-4 6 212 3 6292
nucleic acid binding 1.5669E-3 6 666 4 6292
binding 1.819E-3 6 1294 5 6292
structural molecule activity 2.7446E-3 6 339 3 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle