Protein Overview: SIX1B_DANRE

General Information:
Name(s) found:	SIX1B_DANRE [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|55251053\|emb\|CAH69049.1\| novel protein similar to vertebrate sine oculis homeobox homolog 1 (Drosophila) (SIX1) [Danio rerio] [NCBI NR] gi\|46309555\|ref\|NP_996978.1\| sine oculis homeobox homolog 1b [Danio rerio] [NCBI NR] gi\|42822039\|gb\|AAS46283.1\| homeodomain transcription factor six1a [Danio rerio] [NCBI NR] gi\|42542497\|gb\|AAH66396.1\| Sine oculis homeobox homolog 1b [Danio rerio] [NCBI NR] Homeobox protein six1b OS=Danio rerio GN=six1b PE=1 SV=1 [Swiss-Prot] sine oculis homeobox homolog 1; homeodomain transcription factor six1 [071204_hmrz_cont.fasta] sine oculis homeobox homolog 1 [Danio rerio]gi\|42822039\|gb\|AAS46283.1\| homeodomain transcription factor six1 [Danio rerio]gi\|42542497\|gb\|AAH66396.1\| Sine oculis homeobox homolog 1 [Danio rerio]gi\|55251053\|emb\|CAH69049.1\| novel protein similar to verteb [nrdb_11152004_Chlamydomonas] novel protein similar to vertebrate sine oculis homeobox homolog 1 (Drosophila) (SIX1) [Danio rerio] [nr-271106-contam.fasta] sine oculis homeobox homolog 1 [Danio rerio] [nr-271106-contam.fasta] Sine oculis homeobox homolog 1 (Drosophila) [Danio rerio] [nr-271106-contam.fasta] homeodomain transcription factor six1 [Danio rerio] [nr-271106-contam.fasta] homeobox protein SIX1 [Danio rerio] [NCBI-RefSeq_D_rerio_na_08-30-2010_reversed.fasta]
Organism:	Danio rerio
Length:	284 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA]
Biological Process:	inner ear development [IMP] striated muscle cell differentiation [IMP] adenohypophysis development [IGI] regulation of transcription, DNA-dependent [IEA] regulation of transcription [IEA] peripheral nervous system neuron development [IMP]
Molecular Function:	DNA binding [IEA] transcription factor activity [IEA] transcription regulator activity [IEA] sequence-specific DNA binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMLPSFGFT QEQVACVCEV LQQGGNLERL GRFLWSLPAC DHLHKNESVL KAKAVVAFHR  60
   61 GNFRELYKIL ESHQFSPHNH PKLQQLWLKA HYIEAEKLRG RPLGAVGKYR VRRKFPLPRT 120
  121 IWDGEETSYC FKEKSRGVLR EWYTHNPYPS PREKRELAEA TGLTTTQVSN WFKNRRQRDR 180
  181 AAEAKERENS ENNNTGANKQ NQLSPLDGGK SLMSSSEDEF SPPQSPDQNS VLLLQGNMSH 240
  241 PGASAYSMTG LGAAQSVHGM QGHPHQLQDS LLGPLTSSLV DLGS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.95

Protein Overview: SIX1B_DANRE

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: